Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 PCDHB17P-202ENST00000623466 3066 ntBASIC13.07□□□□□ -0.32
RBM48Q5RL73 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 PTPRVP-205ENST00000641549 5067 ntBASIC13.07□□□□□ -0.32
RBM48Q5RL73 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 PUDPP3-201ENST00000445368 636 ntBASIC13.07□□□□□ -0.32
RBM48Q5RL73 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 AP000344.2-201ENST00000512987 629 ntBASIC13.07□□□□□ -0.32
RBM48Q5RL73 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 AC004835.2-201ENST00000603762 682 ntBASIC13.07□□□□□ -0.32
RBM48Q5RL73 AC138696.2-201ENST00000607376 223 ntBASIC13.07□□□□□ -0.32
RBM48Q5RL73 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 AOC4P-203ENST00000566825 2289 ntBASIC13.07□□□□□ -0.32
RBM48Q5RL73 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 DDX12P-201ENST00000432996 2947 ntBASIC13.07□□□□□ -0.32
RBM48Q5RL73 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 KRT8P28-201ENST00000433288 1390 ntBASIC13.07□□□□□ -0.32
RBM48Q5RL73 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RBM48Q5RL73 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
RBM48Q5RL73 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.06□□□□□ -0.32
RBM48Q5RL73 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 AC009093.10-201ENST00000641956 1442 ntBASIC13.06□□□□□ -0.32
RBM48Q5RL73 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RBM48Q5RL73 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 AC022400.8-201ENST00000623453 3599 ntBASIC13.06□□□□□ -0.32
RBM48Q5RL73 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.06□□□□□ -0.32
RBM48Q5RL73 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.06□□□□□ -0.32
RBM48Q5RL73 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RBM48Q5RL73 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.06□□□□□ -0.32
RBM48Q5RL73 FO681548.1-201ENST00000455617 1132 ntBASIC13.06□□□□□ -0.32
RBM48Q5RL73 AC023141.5-201ENST00000458585 616 ntBASIC13.06□□□□□ -0.32
RBM48Q5RL73 FAM86LP-201ENST00000478302 853 ntBASIC13.06□□□□□ -0.32
RBM48Q5RL73 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RBM48Q5RL73 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RBM48Q5RL73 PGAM5P1-201ENST00000518923 814 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms