Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.02■□□□□ -0
IRX4P78413 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.02■□□□□ -0
IRX4P78413 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.02■□□□□ -0
IRX4P78413 AL023803.2-201ENST00000620080 638 ntBASIC15.02■□□□□ -0
IRX4P78413 AC022748.3-201ENST00000621828 275 ntBASIC15.02■□□□□ -0
IRX4P78413 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
IRX4P78413 AC055811.4-201ENST00000624039 1754 ntBASIC15.02□□□□□ -0.01
IRX4P78413 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IRX4P78413 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IRX4P78413 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IRX4P78413 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IRX4P78413 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
IRX4P78413 AC023090.2-201ENST00000625182 2110 ntBASIC15.02□□□□□ -0.01
IRX4P78413 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.02□□□□□ -0.01
IRX4P78413 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.02□□□□□ -0.01
IRX4P78413 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IRX4P78413 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IRX4P78413 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.02□□□□□ -0.01
IRX4P78413 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
IRX4P78413 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
IRX4P78413 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
IRX4P78413 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
IRX4P78413 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 KRT8P29-201ENST00000420409 1371 ntBASIC15.01□□□□□ -0.01
IRX4P78413 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 POM121L8P-201ENST00000417732 1281 ntBASIC15.01□□□□□ -0.01
IRX4P78413 AC007274.2-201ENST00000421675 662 ntBASIC15.01□□□□□ -0.01
IRX4P78413 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 POM121L9P-203ENST00000441984 1285 ntBASIC15.01□□□□□ -0.01
IRX4P78413 CHMP1AP1-201ENST00000445563 662 ntBASIC15.01□□□□□ -0.01
IRX4P78413 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 AP003171.2-201ENST00000528208 925 ntBASIC15.01□□□□□ -0.01
IRX4P78413 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.01□□□□□ -0.01
IRX4P78413 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.01□□□□□ -0.01
IRX4P78413 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.01□□□□□ -0.01
IRX4P78413 AC026740.1-201ENST00000607068 791 ntBASIC15.01□□□□□ -0.01
IRX4P78413 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
IRX4P78413 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 AC089987.1-201ENST00000551654 2209 ntBASIC15.01□□□□□ -0.01
IRX4P78413 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.01□□□□□ -0.01
IRX4P78413 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IRX4P78413 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15□□□□□ -0.01
IRX4P78413 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15□□□□□ -0.01
IRX4P78413 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15□□□□□ -0.01
IRX4P78413 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15□□□□□ -0.01
IRX4P78413 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
IRX4P78413 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15□□□□□ -0.01
IRX4P78413 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
IRX4P78413 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15□□□□□ -0.01
IRX4P78413 MST1P2-201ENST00000457982 2291 ntBASIC15□□□□□ -0.01
IRX4P78413 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 AL158070.2-201ENST00000623713 1621 ntBASIC15□□□□□ -0.01
IRX4P78413 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
IRX4P78413 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15□□□□□ -0.01
IRX4P78413 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
IRX4P78413 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IRX4P78413 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms