Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SKP1P63208 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.62□□□□□ -0.23
SKP1P63208 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SKP1P63208 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
SKP1P63208 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.62□□□□□ -0.23
SKP1P63208 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.62□□□□□ -0.23
SKP1P63208 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 AL353637.1-201ENST00000451571 732 ntBASIC13.62□□□□□ -0.23
SKP1P63208 RN7SL11P-201ENST00000471305 293 ntBASIC13.62□□□□□ -0.23
SKP1P63208 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.62□□□□□ -0.23
SKP1P63208 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.62□□□□□ -0.23
SKP1P63208 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.62□□□□□ -0.23
SKP1P63208 AL161670.2-201ENST00000557650 1227 ntBASIC13.62□□□□□ -0.23
SKP1P63208 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.62□□□□□ -0.23
SKP1P63208 GPR182-203ENST00000622922 591 ntBASIC13.62□□□□□ -0.23
SKP1P63208 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.62□□□□□ -0.23
SKP1P63208 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.62□□□□□ -0.23
SKP1P63208 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SKP1P63208 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.62□□□□□ -0.23
SKP1P63208 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SKP1P63208 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
SKP1P63208 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SKP1P63208 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.62□□□□□ -0.23
SKP1P63208 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.62□□□□□ -0.23
SKP1P63208 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 AC152010.1-201ENST00000415779 2006 ntBASIC13.61□□□□□ -0.23
SKP1P63208 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 HSPA8P5-201ENST00000456928 2069 ntBASIC13.61□□□□□ -0.23
SKP1P63208 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SKP1P63208 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.61□□□□□ -0.23
SKP1P63208 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.61□□□□□ -0.23
SKP1P63208 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.61□□□□□ -0.23
SKP1P63208 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
SKP1P63208 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 AP002353.1-201ENST00000528257 1599 ntBASIC13.61□□□□□ -0.23
SKP1P63208 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SKP1P63208 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.61□□□□□ -0.23
SKP1P63208 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SKP1P63208 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms