Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.44□□□□□ -0.1
WNT3AP56704 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
WNT3AP56704 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.44□□□□□ -0.1
WNT3AP56704 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.44□□□□□ -0.1
WNT3AP56704 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.44□□□□□ -0.1
WNT3AP56704 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.44□□□□□ -0.1
WNT3AP56704 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.44□□□□□ -0.1
WNT3AP56704 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.44□□□□□ -0.1
WNT3AP56704 MIR4538-201ENST00000581377 78 ntBASIC14.44□□□□□ -0.1
WNT3AP56704 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.44□□□□□ -0.1
WNT3AP56704 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.44□□□□□ -0.1
WNT3AP56704 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.44□□□□□ -0.1
WNT3AP56704 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.44□□□□□ -0.1
WNT3AP56704 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.44□□□□□ -0.1
WNT3AP56704 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
WNT3AP56704 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 CICP4-201ENST00000447359 2812 ntBASIC14.44□□□□□ -0.1
WNT3AP56704 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.44□□□□□ -0.1
WNT3AP56704 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
WNT3AP56704 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
WNT3AP56704 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 SHMT1P1-201ENST00000419974 1312 ntBASIC14.43□□□□□ -0.1
WNT3AP56704 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.43□□□□□ -0.1
WNT3AP56704 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
WNT3AP56704 LINC01815-202ENST00000641468 1409 ntBASIC14.43□□□□□ -0.1
WNT3AP56704 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.43□□□□□ -0.1
WNT3AP56704 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
WNT3AP56704 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 FAM86MP-201ENST00000340703 885 ntBASIC14.43□□□□□ -0.1
WNT3AP56704 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 AC006033.1-201ENST00000440505 426 ntBASIC14.43□□□□□ -0.1
WNT3AP56704 AC125604.1-201ENST00000496255 707 ntBASIC14.43□□□□□ -0.1
WNT3AP56704 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.43□□□□□ -0.1
WNT3AP56704 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.43□□□□□ -0.1
WNT3AP56704 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.43□□□□□ -0.1
WNT3AP56704 MIR3615-201ENST00000581999 87 ntBASIC14.43□□□□□ -0.1
WNT3AP56704 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.43□□□□□ -0.1
WNT3AP56704 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
WNT3AP56704 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 AC072061.1-201ENST00000569710 2234 ntBASIC14.43□□□□□ -0.1
WNT3AP56704 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.43□□□□□ -0.1
WNT3AP56704 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
WNT3AP56704 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.43□□□□□ -0.1
WNT3AP56704 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.43□□□□□ -0.1
WNT3AP56704 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
WNT3AP56704 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 AL590824.1-201ENST00000403828 1349 ntBASIC14.42□□□□□ -0.1
WNT3AP56704 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.42□□□□□ -0.1
WNT3AP56704 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
WNT3AP56704 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms