Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.9□□□□□ -0.18
PDX1P52945 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.9□□□□□ -0.18
PDX1P52945 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
PDX1P52945 AC015802.1-201ENST00000588104 1449 ntBASIC13.9□□□□□ -0.18
PDX1P52945 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.9□□□□□ -0.18
PDX1P52945 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.9□□□□□ -0.18
PDX1P52945 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.9□□□□□ -0.18
PDX1P52945 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.9□□□□□ -0.18
PDX1P52945 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.9□□□□□ -0.18
PDX1P52945 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 AC025271.4-201ENST00000621477 1726 ntBASIC13.9□□□□□ -0.18
PDX1P52945 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PDX1P52945 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.9□□□□□ -0.18
PDX1P52945 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 DUX4L50-201ENST00000455245 715 ntBASIC13.9□□□□□ -0.18
PDX1P52945 RN7SL81P-201ENST00000493781 261 ntBASIC13.9□□□□□ -0.18
PDX1P52945 AC022447.6-201ENST00000515522 438 ntBASIC13.9□□□□□ -0.18
PDX1P52945 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.9□□□□□ -0.18
PDX1P52945 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PDX1P52945 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
PDX1P52945 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PDX1P52945 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.9□□□□□ -0.18
PDX1P52945 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 AC006504.5-208ENST00000588784 2401 ntBASIC13.9□□□□□ -0.18
PDX1P52945 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDX1P52945 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PDX1P52945 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.9□□□□□ -0.19
PDX1P52945 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.9□□□□□ -0.19
PDX1P52945 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PDX1P52945 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PDX1P52945 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.89□□□□□ -0.19
PDX1P52945 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.89□□□□□ -0.19
PDX1P52945 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
PDX1P52945 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.89□□□□□ -0.19
PDX1P52945 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PDX1P52945 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.89□□□□□ -0.19
PDX1P52945 AC012362.1-201ENST00000434906 739 ntBASIC13.89□□□□□ -0.19
PDX1P52945 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.89□□□□□ -0.19
PDX1P52945 AC018463.1-201ENST00000456674 917 ntBASIC13.89□□□□□ -0.19
PDX1P52945 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.89□□□□□ -0.19
PDX1P52945 TPT1P11-201ENST00000458482 498 ntBASIC13.89□□□□□ -0.19
PDX1P52945 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.89□□□□□ -0.19
PDX1P52945 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.89□□□□□ -0.19
PDX1P52945 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.89□□□□□ -0.19
PDX1P52945 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 AC087392.5-201ENST00000612517 489 ntBASIC13.89□□□□□ -0.19
PDX1P52945 AP001184.1-201ENST00000637936 376 ntBASIC13.89□□□□□ -0.19
PDX1P52945 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
PDX1P52945 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.89□□□□□ -0.19
PDX1P52945 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 MARK2P16-201ENST00000605714 1723 ntBASIC13.89□□□□□ -0.19
PDX1P52945 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.89□□□□□ -0.19
PDX1P52945 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PDX1P52945 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDX1P52945 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PDX1P52945 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PDX1P52945 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms