Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDK7P50613 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.71■□□□□ 0.11
CDK7P50613 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDK7P50613 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.71■□□□□ 0.1
CDK7P50613 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CDK7P50613 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDK7P50613 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDK7P50613 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CDK7P50613 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDK7P50613 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.7■□□□□ 0.1
CDK7P50613 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 AC007191.1-201ENST00000623179 2995 ntBASIC15.7■□□□□ 0.1
CDK7P50613 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDK7P50613 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 ODCP-201ENST00000459650 1639 ntBASIC15.7■□□□□ 0.1
CDK7P50613 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDK7P50613 OR52M2P-201ENST00000414298 959 ntBASIC15.7■□□□□ 0.1
CDK7P50613 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 ALG1L3P-201ENST00000503331 765 ntBASIC15.7■□□□□ 0.1
CDK7P50613 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.7■□□□□ 0.1
CDK7P50613 AC092862.1-201ENST00000541534 533 ntBASIC15.7■□□□□ 0.1
CDK7P50613 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.7■□□□□ 0.1
CDK7P50613 AC027139.1-201ENST00000565286 951 ntBASIC15.7■□□□□ 0.1
CDK7P50613 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.7■□□□□ 0.1
CDK7P50613 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.7■□□□□ 0.1
CDK7P50613 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.7■□□□□ 0.1
CDK7P50613 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CDK7P50613 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.7■□□□□ 0.1
CDK7P50613 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDK7P50613 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK7P50613 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK7P50613 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.69■□□□□ 0.1
CDK7P50613 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK7P50613 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK7P50613 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CDK7P50613 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK7P50613 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.69■□□□□ 0.1
CDK7P50613 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK7P50613 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK7P50613 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK7P50613 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.69■□□□□ 0.1
CDK7P50613 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK7P50613 CHCHD2P2-201ENST00000503744 321 ntBASIC15.69■□□□□ 0.1
CDK7P50613 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK7P50613 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK7P50613 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK7P50613 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK7P50613 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK7P50613 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK7P50613 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CDK7P50613 AC104506.1-201ENST00000609247 429 ntBASIC15.69■□□□□ 0.1
CDK7P50613 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK7P50613 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDK7P50613 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms