Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.1□□□□□ -0.31
CENPAP49450 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 HSPA8P5-201ENST00000456928 2069 ntBASIC13.1□□□□□ -0.31
CENPAP49450 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CENPAP49450 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CENPAP49450 PUDPP3-201ENST00000445368 636 ntBASIC13.1□□□□□ -0.31
CENPAP49450 BCRP2-202ENST00000447763 634 ntBASIC13.1□□□□□ -0.31
CENPAP49450 CRB3P1-201ENST00000449338 276 ntBASIC13.1□□□□□ -0.31
CENPAP49450 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.1□□□□□ -0.31
CENPAP49450 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.1□□□□□ -0.31
CENPAP49450 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.1□□□□□ -0.31
CENPAP49450 AL391280.1-201ENST00000506969 1062 ntBASIC13.1□□□□□ -0.31
CENPAP49450 BCRP6-201ENST00000510112 632 ntBASIC13.1□□□□□ -0.31
CENPAP49450 BCRP7-201ENST00000511549 544 ntBASIC13.1□□□□□ -0.31
CENPAP49450 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.1□□□□□ -0.31
CENPAP49450 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
CENPAP49450 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.1□□□□□ -0.31
CENPAP49450 AP000593.2-201ENST00000542775 1433 ntBASIC13.1□□□□□ -0.31
CENPAP49450 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CENPAP49450 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.1□□□□□ -0.31
CENPAP49450 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 AL590440.2-201ENST00000641973 1595 ntBASIC13.1□□□□□ -0.31
CENPAP49450 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CENPAP49450 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.1□□□□□ -0.31
CENPAP49450 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CENPAP49450 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.1□□□□□ -0.31
CENPAP49450 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.1□□□□□ -0.31
CENPAP49450 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.1□□□□□ -0.31
CENPAP49450 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.09□□□□□ -0.31
CENPAP49450 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.09□□□□□ -0.31
CENPAP49450 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.09□□□□□ -0.31
CENPAP49450 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.09□□□□□ -0.31
CENPAP49450 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.09□□□□□ -0.31
CENPAP49450 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 ARSEP1-201ENST00000420443 635 ntBASIC13.09□□□□□ -0.31
CENPAP49450 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.09□□□□□ -0.31
CENPAP49450 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.09□□□□□ -0.31
CENPAP49450 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.09□□□□□ -0.31
CENPAP49450 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.09□□□□□ -0.31
CENPAP49450 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.09□□□□□ -0.31
CENPAP49450 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.09□□□□□ -0.31
CENPAP49450 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.09□□□□□ -0.31
CENPAP49450 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.09□□□□□ -0.31
CENPAP49450 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.09□□□□□ -0.31
CENPAP49450 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC13.09□□□□□ -0.31
CENPAP49450 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.09□□□□□ -0.31
CENPAP49450 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.09□□□□□ -0.31
CENPAP49450 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CENPAP49450 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms