Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.81■□□□□ 0.12
TM4SF4P48230 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC15.81■□□□□ 0.12
TM4SF4P48230 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
TM4SF4P48230 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC15.81■□□□□ 0.12
TM4SF4P48230 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC15.81■□□□□ 0.12
TM4SF4P48230 AC021321.1-201ENST00000607397 1113 ntBASIC15.81■□□□□ 0.12
TM4SF4P48230 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC15.81■□□□□ 0.12
TM4SF4P48230 DLX4-206ENST00000611342 1662 ntBASIC15.81■□□□□ 0.12
TM4SF4P48230 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 AC139100.2-201ENST00000616901 662 ntBASIC15.81■□□□□ 0.12
TM4SF4P48230 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC15.81■□□□□ 0.12
TM4SF4P48230 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.81■□□□□ 0.12
TM4SF4P48230 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.8■□□□□ 0.12
TM4SF4P48230 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TM4SF4P48230 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 AGAP7P-201ENST00000582299 2062 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 AGAP14-201ENST00000624701 2060 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.8■□□□□ 0.12
TM4SF4P48230 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC15.8■□□□□ 0.12
TM4SF4P48230 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.8■□□□□ 0.12
TM4SF4P48230 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.8■□□□□ 0.12
TM4SF4P48230 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TM4SF4P48230 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TM4SF4P48230 KRT8P42-201ENST00000405771 1399 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 POP5-201ENST00000341039 913 ntTSL 2 BASIC15.8■□□□□ 0.12
TM4SF4P48230 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TM4SF4P48230 MIR1226-201ENST00000408658 75 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC15.8■□□□□ 0.12
TM4SF4P48230 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC15.8■□□□□ 0.12
TM4SF4P48230 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.8■□□□□ 0.12
TM4SF4P48230 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC15.8■□□□□ 0.12
TM4SF4P48230 RN7SL47P-201ENST00000488710 299 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC15.8■□□□□ 0.12
TM4SF4P48230 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC15.8■□□□□ 0.12
TM4SF4P48230 BOLA3P2-201ENST00000586496 323 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TM4SF4P48230 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 AC091951.1-201ENST00000512854 2465 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TM4SF4P48230 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TM4SF4P48230 AL109954.1-202ENST00000564051 2148 ntBASIC15.8■□□□□ 0.12
TM4SF4P48230 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.8■□□□□ 0.12
TM4SF4P48230 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.8■□□□□ 0.12
TM4SF4P48230 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TM4SF4P48230 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
TM4SF4P48230 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.79■□□□□ 0.12
TM4SF4P48230 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.79■□□□□ 0.12
TM4SF4P48230 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TM4SF4P48230 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 USP17L6P-201ENST00000382470 1197 ntBASIC15.79■□□□□ 0.12
TM4SF4P48230 THAP4-203ENST00000402545 833 ntTSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 RPSAP16-201ENST00000447583 821 ntBASIC15.79■□□□□ 0.12
TM4SF4P48230 AC007279.1-201ENST00000448547 837 ntBASIC15.79■□□□□ 0.12
TM4SF4P48230 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC15.79■□□□□ 0.12
TM4SF4P48230 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC15.79■□□□□ 0.12
TM4SF4P48230 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TM4SF4P48230 AL031768.1-201ENST00000606542 701 ntBASIC15.79■□□□□ 0.12
TM4SF4P48230 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC15.79■□□□□ 0.12
TM4SF4P48230 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.79■□□□□ 0.12
TM4SF4P48230 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TM4SF4P48230 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms