Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SLC1A1P43005 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 KRT18P36-201ENST00000411618 1276 ntBASIC14.97□□□□□ -0.01
SLC1A1P43005 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC1A1P43005 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 AC005225.4-201ENST00000557330 545 ntBASIC14.97□□□□□ -0.01
SLC1A1P43005 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC1A1P43005 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 AC092053.3-201ENST00000641308 4975 ntBASIC14.97□□□□□ -0.01
SLC1A1P43005 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SLC1A1P43005 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC1A1P43005 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 PTENP1-202ENST00000532280 3996 ntBASIC14.97□□□□□ -0.01
SLC1A1P43005 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SLC1A1P43005 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SLC1A1P43005 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC1A1P43005 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC1A1P43005 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC1A1P43005 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
SLC1A1P43005 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SLC1A1P43005 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC1A1P43005 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.96□□□□□ -0.01
SLC1A1P43005 TUBB8P8-201ENST00000458717 1058 ntBASIC14.96□□□□□ -0.01
SLC1A1P43005 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC1A1P43005 KRT17P8-201ENST00000540749 863 ntBASIC14.96□□□□□ -0.01
SLC1A1P43005 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC1A1P43005 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 DUX4L45-201ENST00000566406 1057 ntBASIC14.96□□□□□ -0.01
SLC1A1P43005 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC1A1P43005 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC1A1P43005 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms