Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.22□□□□□ -0.13
VARSP26640 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.22□□□□□ -0.13
VARSP26640 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.22□□□□□ -0.13
VARSP26640 ALG3P1-201ENST00000508806 1114 ntBASIC14.22□□□□□ -0.13
VARSP26640 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.22□□□□□ -0.13
VARSP26640 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.22□□□□□ -0.13
VARSP26640 C2orf69P2-201ENST00000562032 1123 ntBASIC14.22□□□□□ -0.13
VARSP26640 AP006547.1-201ENST00000563435 692 ntBASIC14.22□□□□□ -0.13
VARSP26640 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 PPY2P-201ENST00000582808 702 ntBASIC14.22□□□□□ -0.13
VARSP26640 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.22□□□□□ -0.13
VARSP26640 AL358472.3-201ENST00000608147 415 ntBASIC14.22□□□□□ -0.13
VARSP26640 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VARSP26640 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.22□□□□□ -0.13
VARSP26640 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VARSP26640 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VARSP26640 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VARSP26640 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 AL590440.2-201ENST00000641973 1595 ntBASIC14.22□□□□□ -0.13
VARSP26640 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.22□□□□□ -0.13
VARSP26640 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.22□□□□□ -0.13
VARSP26640 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.21□□□□□ -0.13
VARSP26640 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC14.21□□□□□ -0.13
VARSP26640 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 AL591122.2-201ENST00000624125 1853 ntBASIC14.21□□□□□ -0.13
VARSP26640 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 AC011498.7-201ENST00000624986 2027 ntBASIC14.21□□□□□ -0.13
VARSP26640 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VARSP26640 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.21□□□□□ -0.13
VARSP26640 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.21□□□□□ -0.13
VARSP26640 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.21□□□□□ -0.13
VARSP26640 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.21□□□□□ -0.13
VARSP26640 AL118558.3-201ENST00000607414 1079 ntBASIC14.21□□□□□ -0.13
VARSP26640 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
VARSP26640 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.21□□□□□ -0.13
VARSP26640 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.21□□□□□ -0.13
VARSP26640 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 KHSRPP1-201ENST00000427983 1768 ntBASIC14.21□□□□□ -0.13
VARSP26640 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VARSP26640 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VARSP26640 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.21□□□□□ -0.14
VARSP26640 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VARSP26640 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.21□□□□□ -0.14
VARSP26640 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VARSP26640 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VARSP26640 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.2□□□□□ -0.14
VARSP26640 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms