Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 DUX4L50-201ENST00000455245 715 ntBASIC16.82■□□□□ 0.28
TOP1P11387 RN7SL277P-201ENST00000481521 288 ntBASIC16.82■□□□□ 0.28
TOP1P11387 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.82■□□□□ 0.28
TOP1P11387 AC093752.3-201ENST00000567343 901 ntBASIC16.82■□□□□ 0.28
TOP1P11387 AC026803.1-201ENST00000569130 274 ntBASIC16.82■□□□□ 0.28
TOP1P11387 PHBP15-201ENST00000574228 665 ntBASIC16.82■□□□□ 0.28
TOP1P11387 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.82■□□□□ 0.28
TOP1P11387 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.82■□□□□ 0.28
TOP1P11387 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.82■□□□□ 0.28
TOP1P11387 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.82■□□□□ 0.28
TOP1P11387 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 AC012044.1-201ENST00000603431 297 ntBASIC16.82■□□□□ 0.28
TOP1P11387 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TOP1P11387 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TOP1P11387 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.82■□□□□ 0.28
TOP1P11387 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 PTENP1-202ENST00000532280 3996 ntBASIC16.81■□□□□ 0.28
TOP1P11387 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TOP1P11387 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TOP1P11387 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.81■□□□□ 0.28
TOP1P11387 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TOP1P11387 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.81■□□□□ 0.28
TOP1P11387 BANF1P3-201ENST00000412556 261 ntBASIC16.81■□□□□ 0.28
TOP1P11387 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.81■□□□□ 0.28
TOP1P11387 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 AC026320.2-201ENST00000434379 478 ntBASIC16.81■□□□□ 0.28
TOP1P11387 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.81■□□□□ 0.28
TOP1P11387 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
TOP1P11387 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 AC006453.1-201ENST00000636037 1257 ntBASIC16.81■□□□□ 0.28
TOP1P11387 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TOP1P11387 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.81■□□□□ 0.28
TOP1P11387 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TOP1P11387 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.81■□□□□ 0.28
TOP1P11387 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.81■□□□□ 0.28
TOP1P11387 CCT8L1P-201ENST00000465400 1674 ntBASIC16.81■□□□□ 0.28
TOP1P11387 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TOP1P11387 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.81■□□□□ 0.28
TOP1P11387 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TOP1P11387 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP1P11387 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP1P11387 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP1P11387 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP1P11387 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TOP1P11387 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP1P11387 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP1P11387 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TOP1P11387 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TOP1P11387 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TOP1P11387 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms