Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.05□□□□□ -0.48
CD74P04233 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.05□□□□□ -0.48
CD74P04233 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.05□□□□□ -0.48
CD74P04233 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CD74P04233 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.05□□□□□ -0.48
CD74P04233 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.05□□□□□ -0.48
CD74P04233 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.05□□□□□ -0.48
CD74P04233 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.05□□□□□ -0.48
CD74P04233 RPSAP43-201ENST00000402237 625 ntBASIC12.05□□□□□ -0.48
CD74P04233 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.05□□□□□ -0.48
CD74P04233 TREML5P-201ENST00000421694 576 ntBASIC12.05□□□□□ -0.48
CD74P04233 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.05□□□□□ -0.48
CD74P04233 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.05□□□□□ -0.48
CD74P04233 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.05□□□□□ -0.48
CD74P04233 DOC2GP-202ENST00000514950 1163 ntBASIC12.05□□□□□ -0.48
CD74P04233 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.05□□□□□ -0.48
CD74P04233 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.05□□□□□ -0.48
CD74P04233 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.05□□□□□ -0.48
CD74P04233 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.05□□□□□ -0.48
CD74P04233 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.05□□□□□ -0.48
CD74P04233 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.05□□□□□ -0.48
CD74P04233 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.05□□□□□ -0.48
CD74P04233 LINC02084-201ENST00000606069 1096 ntBASIC12.05□□□□□ -0.48
CD74P04233 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.05□□□□□ -0.48
CD74P04233 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.05□□□□□ -0.48
CD74P04233 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CD74P04233 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CD74P04233 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.05□□□□□ -0.48
CD74P04233 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.05□□□□□ -0.48
CD74P04233 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.05□□□□□ -0.48
CD74P04233 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD74P04233 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.05□□□□□ -0.48
CD74P04233 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.04□□□□□ -0.48
CD74P04233 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CD74P04233 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.04□□□□□ -0.48
CD74P04233 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.04□□□□□ -0.48
CD74P04233 AP006288.1-201ENST00000446065 395 ntBASIC12.04□□□□□ -0.48
CD74P04233 AL035414.1-201ENST00000451327 857 ntBASIC12.04□□□□□ -0.48
CD74P04233 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.04□□□□□ -0.48
CD74P04233 AC104596.2-201ENST00000512793 793 ntBASIC12.04□□□□□ -0.48
CD74P04233 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
CD74P04233 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.04□□□□□ -0.48
CD74P04233 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.04□□□□□ -0.48
CD74P04233 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 AC099568.2-201ENST00000609194 695 ntBASIC12.04□□□□□ -0.48
CD74P04233 MIR8072-201ENST00000614241 80 ntBASIC12.04□□□□□ -0.48
CD74P04233 AC020917.4-201ENST00000623994 1999 ntBASIC12.04□□□□□ -0.48
CD74P04233 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.04□□□□□ -0.48
CD74P04233 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CD74P04233 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.04□□□□□ -0.48
CD74P04233 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.04□□□□□ -0.48
CD74P04233 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CD74P04233 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD74P04233 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms