Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 MT2A-202ENST00000561491 581 ntTSL 2 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 LINP1-201ENST00000417112 917 ntTSL 2 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 GNG10P1-201ENST00000452289 199 ntBASIC20.69■□□□□ 0.9
HFM1A2PYH4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HFM1A2PYH4 VENTXP3-201ENST00000546480 773 ntBASIC20.69■□□□□ 0.9
HFM1A2PYH4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HFM1A2PYH4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 AC072061.1-201ENST00000569710 2234 ntBASIC20.68■□□□□ 0.9
HFM1A2PYH4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 HNRNPA1P2-207ENST00000432375 960 ntBASIC20.68■□□□□ 0.9
HFM1A2PYH4 AC012362.1-201ENST00000434906 739 ntBASIC20.68■□□□□ 0.9
HFM1A2PYH4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HFM1A2PYH4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC20.68■□□□□ 0.9
HFM1A2PYH4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 AC025271.4-201ENST00000621477 1726 ntBASIC20.67■□□□□ 0.9
HFM1A2PYH4 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 MIR1307-201ENST00000408840 149 ntBASIC20.67■□□□□ 0.9
HFM1A2PYH4 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
HFM1A2PYH4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HFM1A2PYH4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HFM1A2PYH4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC20.66■□□□□ 0.9
HFM1A2PYH4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HFM1A2PYH4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HFM1A2PYH4 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 219.7 ms