Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC78A2IDD5 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC78A2IDD5 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC78A2IDD5 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC78A2IDD5 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC78A2IDD5 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC78A2IDD5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC78A2IDD5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC78A2IDD5 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC78A2IDD5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.58□□□□□ -0.07
CCDC78A2IDD5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 YBX1P6-201ENST00000442962 1002 ntBASIC14.58□□□□□ -0.08
CCDC78A2IDD5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AC100827.2-201ENST00000563214 1194 ntBASIC14.58□□□□□ -0.08
CCDC78A2IDD5 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AC008825.2-201ENST00000603374 718 ntBASIC14.58□□□□□ -0.08
CCDC78A2IDD5 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC78A2IDD5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 AL157407.1-201ENST00000435784 904 ntBASIC14.57□□□□□ -0.08
CCDC78A2IDD5 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 RBM8B-201ENST00000555532 525 ntBASIC14.57□□□□□ -0.08
CCDC78A2IDD5 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 AC005730.2-201ENST00000564549 1184 ntBASIC14.57□□□□□ -0.08
CCDC78A2IDD5 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 AC010328.2-201ENST00000597698 1111 ntBASIC14.57□□□□□ -0.08
CCDC78A2IDD5 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 AL359881.3-201ENST00000602640 1721 ntBASIC14.57□□□□□ -0.08
CCDC78A2IDD5 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC78A2IDD5 AC107918.4-201ENST00000641966 3141 ntBASIC14.57□□□□□ -0.08
CCDC78A2IDD5 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms