Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 HLA-V-201ENST00000429037 534 ntBASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 KRT223P-202ENST00000449164 1292 ntBASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 DUX4L45-201ENST00000566406 1057 ntBASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 AC132192.2-201ENST00000596206 1147 ntBASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 MIR6775-201ENST00000617557 69 ntBASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
HLA-DRB4X5D2U9 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 NDUFAB1P1-201ENST00000404262 460 ntBASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 AC099336.1-201ENST00000417053 1171 ntBASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 CSF2RBP1-201ENST00000447905 391 ntBASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 AC022210.1-201ENST00000449856 793 ntBASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 IGHV3-71-201ENST00000523324 359 ntBASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 DUX4L46-201ENST00000566845 751 ntBASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 EEF1DP1-201ENST00000585891 896 ntBASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 AC244157.2-201ENST00000616239 1006 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms