Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC104640.1-201ENST00000562617 2109 ntBASIC16.55■□□□□ 0.24
CTDP1Q9Y5B0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTDP1Q9Y5B0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.55■□□□□ 0.24
CTDP1Q9Y5B0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CTDP1Q9Y5B0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CTDP1Q9Y5B0 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTDP1Q9Y5B0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.55■□□□□ 0.24
CTDP1Q9Y5B0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTDP1Q9Y5B0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 RPL18AP8-201ENST00000486071 528 ntBASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 AP000322.3-201ENST00000608665 388 ntBASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.54■□□□□ 0.24
CTDP1Q9Y5B0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 AC064801.2-201ENST00000625052 1303 ntBASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 AC006987.1-201ENST00000413610 527 ntBASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 OR8T1P-201ENST00000421347 918 ntBASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 HERC2P11-201ENST00000562845 725 ntBASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 AC100756.2-201ENST00000569537 736 ntBASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 MIR3180-2-201ENST00000581748 88 ntBASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 YRDCP1-201ENST00000621419 643 ntBASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTDP1Q9Y5B0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTDP1Q9Y5B0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms