Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC093433.1-201ENST00000458048 571 ntBASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 MIR1233-2-201ENST00000408138 82 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 MIR1233-1-201ENST00000408722 82 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC098850.1-201ENST00000419919 790 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 DFFBP1-201ENST00000433250 979 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AL035414.1-201ENST00000451327 857 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC145423.3-201ENST00000615987 467 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AL691403.2-201ENST00000618460 490 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 CU634019.7-201ENST00000624153 1185 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 FP236241.2-201ENST00000624906 1185 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 AC002472.3-201ENST00000640124 621 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 DLX4-206ENST00000611342 1662 ntBASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.01□□□□□ -0.81
UBE2D4Q9Y2X8 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms