Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF304Q9HCX3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 FRMPD2B-201ENST00000431305 1347 ntBASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 RN7SL769P-201ENST00000469386 295 ntBASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 CHMP4BP1-201ENST00000556017 588 ntBASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 RN7SL574P-201ENST00000581512 297 ntBASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF304Q9HCX3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AC092117.1-201ENST00000621230 3250 ntBASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AC005089.1-201ENST00000619486 2241 ntBASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AL161932.2-201ENST00000435436 679 ntBASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AC140658.4-201ENST00000561990 352 ntBASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF304Q9HCX3 AC020922.3-201ENST00000595064 547 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms