Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 AC011477.7-201ENST00000617163 1440 ntBASIC12.9□□□□□ -0.34
CHD8Q9HCK8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CHD8Q9HCK8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.9□□□□□ -0.35
CHD8Q9HCK8 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 DIS3L2P1-201ENST00000509197 559 ntBASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AC006273.1-201ENST00000606966 861 ntBASIC12.89□□□□□ -0.35
CHD8Q9HCK8 uc_338.24-201ENST00000617802 182 ntBASIC12.89□□□□□ -0.35
CHD8Q9HCK8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AC022382.1-201ENST00000602768 336 ntBASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AL109954.3-201ENST00000615088 558 ntBASIC12.89□□□□□ -0.35
CHD8Q9HCK8 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHD8Q9HCK8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 RBMXP1-201ENST00000408004 1191 ntBASIC12.88□□□□□ -0.35
CHD8Q9HCK8 GGT8P-201ENST00000418938 532 ntBASIC12.88□□□□□ -0.35
CHD8Q9HCK8 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 LDHAL6CP-201ENST00000502352 1142 ntBASIC12.88□□□□□ -0.35
CHD8Q9HCK8 AP001102.1-201ENST00000528959 409 ntBASIC12.88□□□□□ -0.35
CHD8Q9HCK8 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHD8Q9HCK8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms