Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.66■□□□□ 0.42
UPF2Q9HAU5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.66■□□□□ 0.42
UPF2Q9HAU5 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 USO1-201ENST00000264904 4135 ntTSL 2 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 BEND3P3-201ENST00000611030 2440 ntBASIC17.65■□□□□ 0.42
UPF2Q9HAU5 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPF2Q9HAU5 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
UPF2Q9HAU5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.64■□□□□ 0.42
UPF2Q9HAU5 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 POM121L8P-201ENST00000417732 1281 ntBASIC17.64■□□□□ 0.41
UPF2Q9HAU5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 POM121L9P-203ENST00000441984 1285 ntBASIC17.64■□□□□ 0.41
UPF2Q9HAU5 AC022137.2-201ENST00000503482 481 ntBASIC17.64■□□□□ 0.41
UPF2Q9HAU5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 AC123567.1-201ENST00000548294 1261 ntBASIC17.64■□□□□ 0.41
UPF2Q9HAU5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 ENPP7P14-201ENST00000621765 1040 ntBASIC17.64■□□□□ 0.41
UPF2Q9HAU5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 AP000593.2-201ENST00000542775 1433 ntBASIC17.64■□□□□ 0.41
UPF2Q9HAU5 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPF2Q9HAU5 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 MKRN5P-201ENST00000445263 1467 ntBASIC17.63■□□□□ 0.41
UPF2Q9HAU5 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms