Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AC079414.2-201ENST00000567157 1104 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 RN7SL478P-201ENST00000584358 298 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AC016582.2-202ENST00000587765 1094 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 PRMT1P1-201ENST00000604252 1009 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 OR13I1P-201ENST00000609811 1264 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AC027601.3-201ENST00000622907 509 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNTNAP3Q9BZ76 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CNTNAP3Q9BZ76 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 C8orf49-201ENST00000525043 1968 ntBASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 KATNBL1P2-201ENST00000433311 835 ntBASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 AC004923.3-201ENST00000527532 355 ntBASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 TYMSP2-201ENST00000589501 424 ntBASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 AC087072.1-201ENST00000603727 421 ntBASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.64□□□□□ -0.23
CNTNAP3Q9BZ76 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
CNTNAP3Q9BZ76 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms