Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 AC005252.3-201ENST00000623855 2258 ntBASIC14.15□□□□□ -0.14
TRIM48Q8IWZ4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.15□□□□□ -0.15
TRIM48Q8IWZ4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 AC239868.1-201ENST00000369385 493 ntBASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 XBP1P1-201ENST00000436573 652 ntBASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 NUP210P1-202ENST00000504322 710 ntBASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 PGAM1P5-201ENST00000548011 764 ntBASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 AC005586.2-201ENST00000563946 837 ntBASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM48Q8IWZ4 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 AL596276.2-201ENST00000447525 331 ntBASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 AL353637.1-201ENST00000451571 732 ntBASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 RN7SL720P-201ENST00000488178 304 ntBASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 SORD2P-201ENST00000558556 1069 ntBASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 AC021016.3-201ENST00000608367 477 ntBASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms