Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 LAP3P2-201ENST00000454686 1454 ntBASIC15.42■□□□□ 0.06
HERC6Q8IVU3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.42■□□□□ 0.06
HERC6Q8IVU3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 AC013553.1-201ENST00000560906 267 ntBASIC15.42■□□□□ 0.06
HERC6Q8IVU3 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 AGAP7P-201ENST00000582299 2062 ntBASIC15.42■□□□□ 0.06
HERC6Q8IVU3 AGAP14-201ENST00000624701 2060 ntBASIC15.42■□□□□ 0.06
HERC6Q8IVU3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HERC6Q8IVU3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 AL109809.1-201ENST00000418979 1367 ntBASIC15.41■□□□□ 0.06
HERC6Q8IVU3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 PPP1R2P4-201ENST00000424051 595 ntBASIC15.41■□□□□ 0.06
HERC6Q8IVU3 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 BPIFB5P-201ENST00000457066 1099 ntBASIC15.41■□□□□ 0.06
HERC6Q8IVU3 ALG1L3P-201ENST00000503331 765 ntBASIC15.41■□□□□ 0.06
HERC6Q8IVU3 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 AC145285.5-201ENST00000562217 361 ntBASIC15.41■□□□□ 0.06
HERC6Q8IVU3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 SNORD3B-1-201ENST00000577988 758 ntBASIC15.41■□□□□ 0.06
HERC6Q8IVU3 AL627230.2-201ENST00000613254 655 ntBASIC15.41■□□□□ 0.06
HERC6Q8IVU3 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HERC6Q8IVU3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms