Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AC104794.3-201ENST00000566840 1248 ntBASIC11.47□□□□□ -0.57
FAM78BQ5VT40 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AL391069.4-201ENST00000609583 481 ntBASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AL603764.1-201ENST00000636452 321 ntBASIC11.47□□□□□ -0.57
FAM78BQ5VT40 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 VENTXP1-201ENST00000569334 2716 ntBASIC11.47□□□□□ -0.57
FAM78BQ5VT40 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AC022497.1-201ENST00000624916 3691 ntBASIC11.47□□□□□ -0.57
FAM78BQ5VT40 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 TNRC18P1-201ENST00000502875 3650 ntBASIC11.46□□□□□ -0.57
FAM78BQ5VT40 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 CYMP-203ENST00000474680 1263 ntBASIC11.46□□□□□ -0.57
FAM78BQ5VT40 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 DOC2GP-202ENST00000514950 1163 ntBASIC11.46□□□□□ -0.57
FAM78BQ5VT40 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 TPRX2P-201ENST00000535362 881 ntBASIC11.46□□□□□ -0.57
FAM78BQ5VT40 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.46□□□□□ -0.57
FAM78BQ5VT40 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
FAM78BQ5VT40 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
FAM78BQ5VT40 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms