Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 AC009132.1-201ENST00000565194 320 ntBASIC13.62□□□□□ -0.23
RIF1Q5UIP0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.62□□□□□ -0.23
RIF1Q5UIP0 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 TBC1D27-202ENST00000424239 1573 ntBASIC13.61□□□□□ -0.23
RIF1Q5UIP0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 AC092865.2-201ENST00000439409 971 ntBASIC13.61□□□□□ -0.23
RIF1Q5UIP0 AC007622.1-201ENST00000488371 535 ntBASIC13.61□□□□□ -0.23
RIF1Q5UIP0 RN7SL638P-201ENST00000494527 290 ntBASIC13.61□□□□□ -0.23
RIF1Q5UIP0 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 KF455155.1-201ENST00000604493 303 ntBASIC13.61□□□□□ -0.23
RIF1Q5UIP0 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 AL603832.2-201ENST00000566195 2125 ntBASIC13.61□□□□□ -0.23
RIF1Q5UIP0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 RNA5SP491-201ENST00000362936 118 ntBASIC13.61□□□□□ -0.23
RIF1Q5UIP0 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC13.61□□□□□ -0.23
RIF1Q5UIP0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 AL137077.1-201ENST00000442115 528 ntBASIC13.6□□□□□ -0.23
RIF1Q5UIP0 AC015818.1-201ENST00000451011 244 ntBASIC13.6□□□□□ -0.23
RIF1Q5UIP0 RN7SL47P-201ENST00000488710 299 ntBASIC13.6□□□□□ -0.23
RIF1Q5UIP0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 ELOBP2-201ENST00000526184 355 ntBASIC13.6□□□□□ -0.23
RIF1Q5UIP0 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 AL158032.2-201ENST00000616818 195 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms