Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 NORAD-201ENST00000565493 5339 ntBASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 AL672207.1-201ENST00000328462 1570 ntBASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTC1Q2NKJ3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 RN7SL357P-201ENST00000581065 298 ntBASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.27■□□□□ 0.04
CTC1Q2NKJ3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 CICP17-201ENST00000418553 2377 ntBASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.27■□□□□ 0.03
CTC1Q2NKJ3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AL359183.1-201ENST00000623796 2132 ntBASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AC152010.1-201ENST00000415779 2006 ntBASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 RN7SKP109-201ENST00000410592 316 ntBASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 RN7SL494P-201ENST00000461517 304 ntBASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms