Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.04■□□□□ -0
IRX4P78413 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.04■□□□□ -0
IRX4P78413 AL137783.1-201ENST00000623494 1896 ntBASIC15.03■□□□□ -0
IRX4P78413 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
IRX4P78413 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.03■□□□□ -0
IRX4P78413 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
IRX4P78413 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
IRX4P78413 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.03■□□□□ -0
IRX4P78413 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.03■□□□□ -0
IRX4P78413 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
IRX4P78413 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.03■□□□□ -0
IRX4P78413 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
IRX4P78413 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.03■□□□□ -0
IRX4P78413 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 DPM3-202ENST00000368399 517 ntBASIC15.03■□□□□ -0
IRX4P78413 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 ACTG1P2-201ENST00000415776 1125 ntBASIC15.03■□□□□ -0
IRX4P78413 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 AL354877.1-201ENST00000424412 413 ntBASIC15.03■□□□□ -0
IRX4P78413 ACTG1P11-201ENST00000425411 1125 ntBASIC15.03■□□□□ -0
IRX4P78413 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 AL596276.2-201ENST00000447525 331 ntBASIC15.03■□□□□ -0
IRX4P78413 HIST2H2BB-201ENST00000449108 381 ntBASIC15.03■□□□□ -0
IRX4P78413 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.03■□□□□ -0
IRX4P78413 AL391280.1-201ENST00000506969 1062 ntBASIC15.03■□□□□ -0
IRX4P78413 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.03■□□□□ -0
IRX4P78413 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.03■□□□□ -0
IRX4P78413 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.03■□□□□ -0
IRX4P78413 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 AC100757.4-201ENST00000626934 759 ntBASIC15.03■□□□□ -0
IRX4P78413 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
IRX4P78413 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
IRX4P78413 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.03■□□□□ -0
IRX4P78413 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
IRX4P78413 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.03■□□□□ -0
IRX4P78413 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.02■□□□□ -0
IRX4P78413 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.02■□□□□ -0
IRX4P78413 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
IRX4P78413 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.02■□□□□ -0
IRX4P78413 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 AL354702.1-201ENST00000442006 1960 ntBASIC15.02■□□□□ -0
IRX4P78413 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
IRX4P78413 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.02■□□□□ -0
IRX4P78413 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.02■□□□□ -0
IRX4P78413 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.02■□□□□ -0
IRX4P78413 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.02■□□□□ -0
IRX4P78413 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
IRX4P78413 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.02■□□□□ -0
IRX4P78413 AC069218.1-201ENST00000435269 762 ntBASIC15.02■□□□□ -0
IRX4P78413 AC011742.3-201ENST00000439053 820 ntBASIC15.02■□□□□ -0
IRX4P78413 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.02■□□□□ -0
IRX4P78413 AC004066.1-201ENST00000502488 802 ntBASIC15.02■□□□□ -0
IRX4P78413 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IRX4P78413 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.02■□□□□ -0
IRX4P78413 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.02■□□□□ -0
IRX4P78413 AC022447.6-201ENST00000515522 438 ntBASIC15.02■□□□□ -0
IRX4P78413 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
IRX4P78413 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.02■□□□□ -0
IRX4P78413 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.02■□□□□ -0
IRX4P78413 MIR3147-201ENST00000577811 66 ntBASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms