Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN20P56880 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.2□□□□□ -0.3
CLDN20P56880 AL157407.1-201ENST00000435784 904 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 FAM58BP-201ENST00000439056 645 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 AC012441.2-201ENST00000444843 739 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 AC104073.2-201ENST00000453737 312 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 KRT8P13-201ENST00000463294 1010 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 RPL18P13-201ENST00000478088 569 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN20P56880 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
CLDN20P56880 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN20P56880 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN20P56880 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN20P56880 AC005962.1-201ENST00000584100 773 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 AC005324.6-201ENST00000587972 613 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLDN20P56880 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.2□□□□□ -0.3
CLDN20P56880 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN20P56880 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLDN20P56880 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN20P56880 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN20P56880 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CLDN20P56880 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN20P56880 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN20P56880 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN20P56880 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLDN20P56880 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN20P56880 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLDN20P56880 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN20P56880 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN20P56880 AL645933.1-201ENST00000440087 609 ntBASIC13.19□□□□□ -0.3
CLDN20P56880 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN20P56880 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN20P56880 AC004923.1-202ENST00000642106 209 ntBASIC13.19□□□□□ -0.3
CLDN20P56880 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN20P56880 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN20P56880 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
CLDN20P56880 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN20P56880 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 AGGF1P1-201ENST00000509500 2073 ntBASIC13.19□□□□□ -0.3
CLDN20P56880 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
CLDN20P56880 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN20P56880 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CLDN20P56880 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 AC068760.1-201ENST00000493579 1953 ntBASIC13.18□□□□□ -0.3
CLDN20P56880 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CLDN20P56880 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms