Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 EML1-203ENST00000334192 4064 ntTSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
APOC4P55056 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
APOC4P55056 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 KRT17P5-201ENST00000332088 839 ntBASIC10.51□□□□□ -0.73
APOC4P55056 JTB-202ENST00000356648 1040 ntTSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
APOC4P55056 AC092580.1-201ENST00000433998 658 ntBASIC10.51□□□□□ -0.73
APOC4P55056 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC10.51□□□□□ -0.73
APOC4P55056 CEP164P1-201ENST00000455142 418 ntBASIC10.51□□□□□ -0.73
APOC4P55056 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC10.51□□□□□ -0.73
APOC4P55056 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC10.51□□□□□ -0.73
APOC4P55056 AC051619.9-201ENST00000623237 597 ntBASIC10.51□□□□□ -0.73
APOC4P55056 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 AL590824.1-201ENST00000403828 1349 ntBASIC10.51□□□□□ -0.73
APOC4P55056 TEKT4P2-202ENST00000559466 1312 ntBASIC10.51□□□□□ -0.73
APOC4P55056 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 AL136379.1-201ENST00000623471 2642 ntBASIC10.51□□□□□ -0.73
APOC4P55056 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.51□□□□□ -0.73
APOC4P55056 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.5□□□□□ -0.73
APOC4P55056 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
APOC4P55056 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC10.5□□□□□ -0.73
APOC4P55056 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
APOC4P55056 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
APOC4P55056 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
APOC4P55056 USP17L6P-201ENST00000382470 1197 ntBASIC10.5□□□□□ -0.73
APOC4P55056 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.5□□□□□ -0.73
APOC4P55056 AC006987.1-201ENST00000413610 527 ntBASIC10.5□□□□□ -0.73
APOC4P55056 HINT2P1-201ENST00000419438 481 ntBASIC10.5□□□□□ -0.73
APOC4P55056 AL807761.2-201ENST00000422849 729 ntBASIC10.5□□□□□ -0.73
APOC4P55056 HLA-DPB2-205ENST00000435074 1188 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms