Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 MIR4522-201ENST00000584932 87 ntBASIC13.38□□□□□ -0.27
EFNA3P52797 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNA3P52797 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.38□□□□□ -0.27
EFNA3P52797 AC009560.1-201ENST00000620208 434 ntBASIC13.38□□□□□ -0.27
EFNA3P52797 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 AC128714.1-201ENST00000637035 887 ntBASIC13.38□□□□□ -0.27
EFNA3P52797 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNA3P52797 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
EFNA3P52797 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
EFNA3P52797 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
EFNA3P52797 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNA3P52797 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 MIR33B-201ENST00000385104 96 ntBASIC13.37□□□□□ -0.27
EFNA3P52797 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
EFNA3P52797 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNA3P52797 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 DUTP3-201ENST00000450025 415 ntBASIC13.37□□□□□ -0.27
EFNA3P52797 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.37□□□□□ -0.27
EFNA3P52797 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.37□□□□□ -0.27
EFNA3P52797 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.37□□□□□ -0.27
EFNA3P52797 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.37□□□□□ -0.27
EFNA3P52797 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 YRDCP1-201ENST00000621419 643 ntBASIC13.37□□□□□ -0.27
EFNA3P52797 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
EFNA3P52797 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 MST1P2-201ENST00000457982 2291 ntBASIC13.37□□□□□ -0.27
EFNA3P52797 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNA3P52797 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNA3P52797 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNA3P52797 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
EFNA3P52797 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.36□□□□□ -0.27
EFNA3P52797 HINT2P1-201ENST00000419438 481 ntBASIC13.36□□□□□ -0.27
EFNA3P52797 AL807761.2-201ENST00000422849 729 ntBASIC13.36□□□□□ -0.27
EFNA3P52797 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 AC069218.1-201ENST00000435269 762 ntBASIC13.36□□□□□ -0.27
EFNA3P52797 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.36□□□□□ -0.27
EFNA3P52797 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 AC114947.1-202ENST00000514136 344 ntBASIC13.36□□□□□ -0.27
EFNA3P52797 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.36□□□□□ -0.27
EFNA3P52797 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.36□□□□□ -0.27
EFNA3P52797 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.36□□□□□ -0.27
EFNA3P52797 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.36□□□□□ -0.27
EFNA3P52797 AC018635.2-201ENST00000608625 364 ntBASIC13.36□□□□□ -0.27
EFNA3P52797 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.36□□□□□ -0.27
EFNA3P52797 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms