Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CSNK1EP49674 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.94□□□□□ -0.18
CSNK1EP49674 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CSNK1EP49674 OR52M2P-201ENST00000414298 959 ntBASIC13.94□□□□□ -0.18
CSNK1EP49674 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 AL135901.1-201ENST00000451812 333 ntBASIC13.94□□□□□ -0.18
CSNK1EP49674 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.94□□□□□ -0.18
CSNK1EP49674 GOLGA2P7-209ENST00000560408 745 ntBASIC13.94□□□□□ -0.18
CSNK1EP49674 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 HMGB1P24-201ENST00000611897 328 ntBASIC13.94□□□□□ -0.18
CSNK1EP49674 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.94□□□□□ -0.18
CSNK1EP49674 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CSNK1EP49674 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CSNK1EP49674 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CSNK1EP49674 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1EP49674 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1EP49674 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 AL672207.1-201ENST00000328462 1570 ntBASIC13.93□□□□□ -0.18
CSNK1EP49674 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CSNK1EP49674 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CSNK1EP49674 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1EP49674 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 RN7SL582P-201ENST00000491078 279 ntBASIC13.93□□□□□ -0.18
CSNK1EP49674 SLC25A15P3-201ENST00000505530 290 ntBASIC13.93□□□□□ -0.18
CSNK1EP49674 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1EP49674 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1EP49674 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CSNK1EP49674 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1EP49674 TRMT112P3-201ENST00000580149 358 ntBASIC13.93□□□□□ -0.18
CSNK1EP49674 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1EP49674 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1EP49674 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 MIR4265-201ENST00000582152 99 ntBASIC13.93□□□□□ -0.18
CSNK1EP49674 MIR6074-201ENST00000612054 107 ntBASIC13.93□□□□□ -0.18
CSNK1EP49674 AC091769.1-201ENST00000619576 568 ntBASIC13.93□□□□□ -0.18
CSNK1EP49674 MIR6746-201ENST00000620971 63 ntBASIC13.93□□□□□ -0.18
CSNK1EP49674 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1EP49674 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1EP49674 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CSNK1EP49674 AC011498.7-201ENST00000624986 2027 ntBASIC13.93□□□□□ -0.18
CSNK1EP49674 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1EP49674 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1EP49674 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1EP49674 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1EP49674 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CSNK1EP49674 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms