Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PCP4P48539 DGCR11-201ENST00000609958 2214 ntBASIC9.21□□□□□ -0.93
PCP4P48539 CPEB1-AS1-202ENST00000618020 2994 ntBASIC9.21□□□□□ -0.93
PCP4P48539 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
PCP4P48539 BRD4-201ENST00000263377 7169 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
PCP4P48539 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC9.21□□□□□ -0.93
PCP4P48539 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC9.21□□□□□ -0.93
PCP4P48539 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC9.21□□□□□ -0.93
PCP4P48539 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
PCP4P48539 ANKRD42-203ENST00000393392 2302 ntTSL 2 BASIC9.21□□□□□ -0.93
PCP4P48539 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC9.21□□□□□ -0.93
PCP4P48539 SLC12A3-205ENST00000566786 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
PCP4P48539 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PCP4P48539 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PCP4P48539 SLC25A21-201ENST00000331299 2785 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
PCP4P48539 RSPH10B-203ENST00000405415 3222 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PCP4P48539 UQCC1-202ENST00000359226 2036 ntTSL 4 BASIC9.21□□□□□ -0.93
PCP4P48539 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PCP4P48539 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
PCP4P48539 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 AC027801.1-201ENST00000376609 2100 ntTSL 2 BASIC9.21□□□□□ -0.94
PCP4P48539 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
PCP4P48539 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC9.21□□□□□ -0.94
PCP4P48539 AC079905.2-201ENST00000550105 247 ntBASIC9.21□□□□□ -0.94
PCP4P48539 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 ARSG-202ENST00000452479 1733 ntTSL 5 BASIC9.21□□□□□ -0.94
PCP4P48539 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 NR2F2-203ENST00000421109 2214 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 CLUAP1-203ENST00000572600 2221 ntTSL 2 BASIC9.21□□□□□ -0.94
PCP4P48539 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 CCDC14-207ENST00000433542 3260 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC9.21□□□□□ -0.94
PCP4P48539 OIT3-201ENST00000334011 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 NUP58-202ENST00000381736 4332 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 POM121L1P-201ENST00000402027 1934 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 SIDT2-202ENST00000324225 4406 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 AL353593.2-201ENST00000602529 1483 ntBASIC9.21□□□□□ -0.94
PCP4P48539 AC010201.2-201ENST00000605595 1495 ntBASIC9.21□□□□□ -0.94
PCP4P48539 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC9.21□□□□□ -0.94
PCP4P48539 MELK-201ENST00000298048 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 WARS-203ENST00000358655 2466 ntTSL 2 BASIC9.21□□□□□ -0.94
PCP4P48539 UTP14A-201ENST00000394422 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 LYPD6-201ENST00000334166 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PCP4P48539 HSPA8P5-201ENST00000456928 2069 ntBASIC9.2□□□□□ -0.94
PCP4P48539 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 AL607033.1-201ENST00000623900 1599 ntBASIC9.2□□□□□ -0.94
PCP4P48539 GRM3-201ENST00000361669 4268 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC9.2□□□□□ -0.94
PCP4P48539 AC097382.2-201ENST00000500031 4300 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
PCP4P48539 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 SLC6A3-201ENST00000270349 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 RNGTT-201ENST00000369475 1725 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 ACAD10-203ENST00000455480 4071 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 NXF1-211ENST00000531709 4128 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 TEKT3-202ENST00000395930 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 SORBS2-231ENST00000449407 3049 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 UQCC1-205ENST00000374385 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 ZSCAN25-204ENST00000394152 4349 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PCP4P48539 GFM1-210ENST00000486715 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC9.2□□□□□ -0.94
PCP4P48539 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
PCP4P48539 SNX5-217ENST00000606557 1087 ntBASIC9.2□□□□□ -0.94
PCP4P48539 MOB2-207ENST00000614710 705 ntTSL 5 BASIC9.2□□□□□ -0.94
PCP4P48539 AC105105.1-201ENST00000591360 2553 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 ITGAE-201ENST00000263087 3858 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 PCDHGA1-202ENST00000517417 4604 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 NFASC-223ENST00000513543 3974 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 AL078604.2-201ENST00000430078 2002 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 TOPORS-201ENST00000360538 4098 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 GFOD2-202ENST00000602279 5507 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 SLC22A24-202ENST00000417740 2098 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
PCP4P48539 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
PCP4P48539 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC9.2□□□□□ -0.94
PCP4P48539 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 TMEM108-202ENST00000393130 2165 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 INPP4A-210ENST00000523221 2934 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 OGDHL-201ENST00000374103 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms