RNA–Protein interactions for RNA: ENST00000263087.8

ITGAE-201, Transcript of integrin subunit alpha E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGAE, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-201ENST00000263087 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
ITGAE-201ENST00000263087 DCAF8L2P0C7V8 631 aa18.48■□□□□ 0.55
ITGAE-201ENST00000263087 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
ITGAE-201ENST00000263087 SHROOM4Q9ULL8 1493 aa18.11■□□□□ 0.49
ITGAE-201ENST00000263087 EHMT2Q96KQ7 1210 aa17.54■□□□□ 0.4
ITGAE-201ENST00000263087 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
ITGAE-201ENST00000263087 HRCP23327 699 aa17.19■□□□□ 0.34
ITGAE-201ENST00000263087 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
ITGAE-201ENST00000263087 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
ITGAE-201ENST00000263087 TTBK1Q5TCY1 1321 aaPredicted RBP16.92■□□□□ 0.3
ITGAE-201ENST00000263087 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
ITGAE-201ENST00000263087 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
ITGAE-201ENST00000263087 LOC105371045A0A1W2PR82 267 aa16.75■□□□□ 0.27
ITGAE-201ENST00000263087 ZEB1P37275 1124 aaPredicted RBP16.6■□□□□ 0.25
ITGAE-201ENST00000263087 TRIM41Q8WV44 630 aa16.59■□□□□ 0.25
ITGAE-201ENST00000263087 TRIM26Q12899 539 aaPredicted RBP16.58■□□□□ 0.25
ITGAE-201ENST00000263087 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
ITGAE-201ENST00000263087 CENPBP07199 599 aaPredicted RBP16.38■□□□□ 0.21
ITGAE-201ENST00000263087 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
ITGAE-201ENST00000263087 MYT1Q01538 1121 aa16.24■□□□□ 0.19
ITGAE-201ENST00000263087 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
ITGAE-201ENST00000263087 YTHDC1Q96MU7 727 aaKnown RBP16.2■□□□□ 0.18
ITGAE-201ENST00000263087 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
ITGAE-201ENST00000263087 APLP2Q06481 763 aa16.17■□□□□ 0.18
ITGAE-201ENST00000263087 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
ITGAE-201ENST00000263087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
ITGAE-201ENST00000263087 GTF3C3Q9Y5Q9 886 aa16.07■□□□□ 0.16
ITGAE-201ENST00000263087 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.15
ITGAE-201ENST00000263087 DCAF1Q9Y4B6 1507 aa16.02■□□□□ 0.15
ITGAE-201ENST00000263087 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
ITGAE-201ENST00000263087 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
ITGAE-201ENST00000263087 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
ITGAE-201ENST00000263087 ATP1B4Q9UN42 357 aaPredicted RBP15.91■□□□□ 0.14
ITGAE-201ENST00000263087 ITGAEP38570 1179 aa15.83■□□□□ 0.12
ITGAE-201ENST00000263087 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
ITGAE-201ENST00000263087 ABCC9O60706 1549 aa15.71■□□□□ 0.1
ITGAE-201ENST00000263087 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
ITGAE-201ENST00000263087 ZNF316A6NFI3 1004 aaPredicted RBP15.62■□□□□ 0.09
ITGAE-201ENST00000263087 CCDC180Q9P1Z9 1646 aa15.6■□□□□ 0.09
ITGAE-201ENST00000263087 CNGB1Q14028 1251 aaPredicted RBP15.49■□□□□ 0.07
ITGAE-201ENST00000263087 ERICH6Q7L0X2 663 aa15.47■□□□□ 0.07
ITGAE-201ENST00000263087 NEFLP07196 543 aa15.46■□□□□ 0.07
ITGAE-201ENST00000263087 MIER1Q8N108 512 aa15.43■□□□□ 0.06
ITGAE-201ENST00000263087 SCRIBQ14160 1630 aa15.41■□□□□ 0.06
ITGAE-201ENST00000263087 BCANQ96GW7 911 aa15.41■□□□□ 0.06
ITGAE-201ENST00000263087 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
ITGAE-201ENST00000263087 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
ITGAE-201ENST00000263087 FAM50AQ14320 339 aaKnown RBP15.28■□□□□ 0.04
ITGAE-201ENST00000263087 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
ITGAE-201ENST00000263087 P3H3Q8IVL6 736 aa15.23■□□□□ 0.03
ITGAE-201ENST00000263087 FKBP8Q14318 412 aa15.11■□□□□ 0.01
ITGAE-201ENST00000263087 ARID3CA6NKF2 412 aa15.1■□□□□ 0.01
ITGAE-201ENST00000263087 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
ITGAE-201ENST00000263087 ANP32EQ9BTT0 268 aa15.08■□□□□ 0
ITGAE-201ENST00000263087 HIRIP3Q9BW71 556 aaPredicted RBP15.08■□□□□ 0
ITGAE-201ENST00000263087 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
ITGAE-201ENST00000263087 CECR2Q9BXF3 1484 aa15.05■□□□□ 0
ITGAE-201ENST00000263087 CEP162Q5TB80 1403 aa15.02■□□□□ -0
ITGAE-201ENST00000263087 TRIM52Q96A61 297 aa15□□□□□ -0.01
ITGAE-201ENST00000263087 DDX10Q13206 875 aaKnown RBP14.99□□□□□ -0.01
ITGAE-201ENST00000263087 RB1CC1Q8TDY2 1594 aa14.96□□□□□ -0.01
ITGAE-201ENST00000263087 BCL11AQ9H165 835 aa14.96□□□□□ -0.01
ITGAE-201ENST00000263087 ZNF326Q5BKZ1 582 aaKnown RBP14.94□□□□□ -0.02
ITGAE-201ENST00000263087 ANP32CO43423 234 aa14.94□□□□□ -0.02
ITGAE-201ENST00000263087 CDK11AQ9UQ88 783 aaPredicted RBP14.94□□□□□ -0.02
ITGAE-201ENST00000263087 TSHZ2Q9NRE2 1034 aa14.91□□□□□ -0.02
ITGAE-201ENST00000263087 SOGA1O94964 1423 aa14.89□□□□□ -0.03
ITGAE-201ENST00000263087 TNIKQ9UKE5 1360 aa14.86□□□□□ -0.03
ITGAE-201ENST00000263087 CLIP1P30622 1438 aa14.86□□□□□ -0.03
ITGAE-201ENST00000263087 SENP3-EIF4A1A0A087X0R7 540 aa14.84□□□□□ -0.03
ITGAE-201ENST00000263087 IRX6P78412 446 aaPredicted RBP14.83□□□□□ -0.04
ITGAE-201ENST00000263087 RTL5Q5HYW3 569 aaPredicted RBP14.8□□□□□ -0.04
ITGAE-201ENST00000263087 CHIC2Q9UKJ5 165 aa14.79□□□□□ -0.04
ITGAE-201ENST00000263087 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
ITGAE-201ENST00000263087 ABCC8Q09428 1581 aa14.77□□□□□ -0.04
ITGAE-201ENST00000263087 HNRNPUQ00839 825 aaKnown RBP eCLIP14.77□□□□□ -0.04
ITGAE-201ENST00000263087 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
ITGAE-201ENST00000263087 RBM19Q9Y4C8 960 aaKnown RBP14.75□□□□□ -0.05
ITGAE-201ENST00000263087 MYT1LQ9UL68 1186 aa14.75□□□□□ -0.05
ITGAE-201ENST00000263087 FBLN2P98095 1184 aa14.74□□□□□ -0.05
ITGAE-201ENST00000263087 SIN3AQ96ST3 1273 aa14.74□□□□□ -0.05
ITGAE-201ENST00000263087 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
ITGAE-201ENST00000263087 KCNH8Q96L42 1107 aa14.71□□□□□ -0.05
ITGAE-201ENST00000263087 WRNQ14191 1432 aaPredicted RBP eCLIP14.71□□□□□ -0.05
ITGAE-201ENST00000263087 FAM9BQ8IZU0 186 aa14.71□□□□□ -0.05
ITGAE-201ENST00000263087 NBR1Q14596 966 aa14.69□□□□□ -0.06
ITGAE-201ENST00000263087 ZNF777Q9ULD5 760 aaPredicted RBP14.68□□□□□ -0.06
ITGAE-201ENST00000263087 EEA1Q15075 1411 aa14.68□□□□□ -0.06
ITGAE-201ENST00000263087 KANK4Q5T7N3 995 aaPredicted RBP14.67□□□□□ -0.06
ITGAE-201ENST00000263087 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
ITGAE-201ENST00000263087 TONSLQ96HA7 1378 aa14.65□□□□□ -0.06
ITGAE-201ENST00000263087 RUSC2Q8N2Y8 1516 aa14.63□□□□□ -0.07
ITGAE-201ENST00000263087 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
ITGAE-201ENST00000263087 RRP7BPQ9NSQ0 103 aa14.62□□□□□ -0.07
ITGAE-201ENST00000263087 WIZO95785 1651 aa14.6□□□□□ -0.07
ITGAE-201ENST00000263087 DAXXQ9UER7 740 aaPredicted RBP14.59□□□□□ -0.07
ITGAE-201ENST00000263087 ANP32AP39687 249 aaKnown RBP14.58□□□□□ -0.08
ITGAE-201ENST00000263087 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
ITGAE-201ENST00000263087 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
ITGAE-201ENST00000263087 VPS8Q8N3P4 1428 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms