Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 AC130686.1-201ENST00000622936 2466 ntBASIC14.23□□□□□ -0.13
VARSP26640 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VARSP26640 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 SLC25A24P2-201ENST00000415059 510 ntBASIC14.23□□□□□ -0.13
VARSP26640 AL355994.1-201ENST00000424379 260 ntBASIC14.23□□□□□ -0.13
VARSP26640 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.23□□□□□ -0.13
VARSP26640 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.23□□□□□ -0.13
VARSP26640 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.23□□□□□ -0.13
VARSP26640 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.23□□□□□ -0.13
VARSP26640 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC14.23□□□□□ -0.13
VARSP26640 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.23□□□□□ -0.13
VARSP26640 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.23□□□□□ -0.13
VARSP26640 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.23□□□□□ -0.13
VARSP26640 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.23□□□□□ -0.13
VARSP26640 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VARSP26640 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
VARSP26640 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 AC015909.5-201ENST00000624336 2266 ntBASIC14.22□□□□□ -0.13
VARSP26640 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 KRT8P24-201ENST00000560290 1559 ntBASIC14.22□□□□□ -0.13
VARSP26640 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VARSP26640 TCAM1P-207ENST00000485295 1537 ntBASIC14.22□□□□□ -0.13
VARSP26640 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.22□□□□□ -0.13
VARSP26640 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VARSP26640 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VARSP26640 BTBD6P1-201ENST00000412176 1267 ntBASIC14.22□□□□□ -0.13
VARSP26640 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms