Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 NAT9-204ENST00000578822 839 ntTSL 3 BASIC23.49■■□□□ 1.35
CFTRP13569 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
CFTRP13569 AC005332.2-201ENST00000590010 930 ntBASIC23.49■■□□□ 1.35
CFTRP13569 AC021321.1-201ENST00000607397 1113 ntBASIC23.49■■□□□ 1.35
CFTRP13569 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC23.49■■□□□ 1.35
CFTRP13569 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CFTRP13569 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CFTRP13569 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CFTRP13569 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CFTRP13569 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC23.48■■□□□ 1.35
CFTRP13569 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CFTRP13569 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
CFTRP13569 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC23.48■■□□□ 1.35
CFTRP13569 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CFTRP13569 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CFTRP13569 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC23.48■■□□□ 1.35
CFTRP13569 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CFTRP13569 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CFTRP13569 SERF2-204ENST00000402131 586 ntTSL 2 BASIC23.48■■□□□ 1.35
CFTRP13569 U3.41-201ENST00000408711 219 ntBASIC23.48■■□□□ 1.35
CFTRP13569 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC23.48■■□□□ 1.35
CFTRP13569 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC23.48■■□□□ 1.35
CFTRP13569 RN7SL33P-201ENST00000462543 342 ntBASIC23.48■■□□□ 1.35
CFTRP13569 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC23.48■■□□□ 1.35
CFTRP13569 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC23.48■■□□□ 1.35
CFTRP13569 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC23.48■■□□□ 1.35
CFTRP13569 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC23.48■■□□□ 1.35
CFTRP13569 CDIPT-AS1-203ENST00000638164 713 ntBASIC23.48■■□□□ 1.35
CFTRP13569 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CFTRP13569 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC23.48■■□□□ 1.35
CFTRP13569 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CFTRP13569 POR-201ENST00000394893 2532 ntTSL 5 BASIC23.47■■□□□ 1.35
CFTRP13569 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC23.47■■□□□ 1.35
CFTRP13569 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
CFTRP13569 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFTRP13569 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CFTRP13569 AP000437.1-201ENST00000624057 2085 ntBASIC23.47■■□□□ 1.35
CFTRP13569 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CFTRP13569 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFTRP13569 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CFTRP13569 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CFTRP13569 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
CFTRP13569 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFTRP13569 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFTRP13569 MARCKSL1P2-201ENST00000401037 976 ntBASIC23.47■■□□□ 1.35
CFTRP13569 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC23.47■■□□□ 1.35
CFTRP13569 RPL3P9-201ENST00000463217 1183 ntBASIC23.47■■□□□ 1.35
CFTRP13569 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC23.47■■□□□ 1.35
CFTRP13569 TMA16-204ENST00000508268 608 ntTSL 2 BASIC23.47■■□□□ 1.35
CFTRP13569 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC23.47■■□□□ 1.35
CFTRP13569 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC23.47■■□□□ 1.35
CFTRP13569 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC23.47■■□□□ 1.35
CFTRP13569 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC23.47■■□□□ 1.35
CFTRP13569 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC23.47■■□□□ 1.35
CFTRP13569 AP000553.2-201ENST00000609038 441 ntBASIC23.47■■□□□ 1.35
CFTRP13569 AC148476.1-201ENST00000622182 705 ntBASIC23.47■■□□□ 1.35
CFTRP13569 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CFTRP13569 AC002350.2-201ENST00000623894 1828 ntBASIC23.47■■□□□ 1.35
CFTRP13569 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFTRP13569 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CFTRP13569 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC23.46■■□□□ 1.35
CFTRP13569 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 WDR54-202ENST00000409791 854 ntTSL 3 BASIC23.46■■□□□ 1.35
CFTRP13569 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC23.46■■□□□ 1.35
CFTRP13569 ASLP1-201ENST00000428790 637 ntBASIC23.46■■□□□ 1.35
CFTRP13569 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC23.46■■□□□ 1.35
CFTRP13569 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC23.46■■□□□ 1.35
CFTRP13569 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC23.46■■□□□ 1.35
CFTRP13569 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC23.46■■□□□ 1.35
CFTRP13569 AL109954.3-201ENST00000615088 558 ntBASIC23.46■■□□□ 1.35
CFTRP13569 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC23.46■■□□□ 1.35
CFTRP13569 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC23.46■■□□□ 1.35
CFTRP13569 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC23.46■■□□□ 1.35
CFTRP13569 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC23.46■■□□□ 1.35
CFTRP13569 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFTRP13569 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
CFTRP13569 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CFTRP13569 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
CFTRP13569 MKRN7P-201ENST00000433469 1371 ntBASIC23.45■■□□□ 1.35
CFTRP13569 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CFTRP13569 JPT2-203ENST00000382711 894 ntTSL 4 BASIC23.45■■□□□ 1.34
CFTRP13569 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC23.45■■□□□ 1.34
CFTRP13569 TULP3P1-202ENST00000453253 1291 ntBASIC23.45■■□□□ 1.34
CFTRP13569 AC104117.4-201ENST00000521486 847 ntBASIC23.45■■□□□ 1.34
CFTRP13569 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC23.45■■□□□ 1.34
CFTRP13569 AC120498.5-201ENST00000561757 299 ntBASIC23.45■■□□□ 1.34
CFTRP13569 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CFTRP13569 AC113367.3-201ENST00000508316 1912 ntBASIC23.45■■□□□ 1.34
CFTRP13569 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 282 ms