Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
FAM228BP0C875 AL359845.1-201ENST00000458202 1648 ntBASIC15.28■□□□□ 0.04
FAM228BP0C875 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
FAM228BP0C875 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FAM228BP0C875 AL445209.1-201ENST00000607269 3491 ntBASIC15.27■□□□□ 0.04
FAM228BP0C875 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM228BP0C875 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
FAM228BP0C875 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
FAM228BP0C875 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.27■□□□□ 0.04
FAM228BP0C875 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
FAM228BP0C875 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
FAM228BP0C875 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
FAM228BP0C875 CARS-214ENST00000529772 2637 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM228BP0C875 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.27■□□□□ 0.04
FAM228BP0C875 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM228BP0C875 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM228BP0C875 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
FAM228BP0C875 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.27■□□□□ 0.04
FAM228BP0C875 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.27■□□□□ 0.04
FAM228BP0C875 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM228BP0C875 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.27■□□□□ 0.04
FAM228BP0C875 AC004623.1-201ENST00000624592 2127 ntBASIC15.27■□□□□ 0.04
FAM228BP0C875 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM228BP0C875 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM228BP0C875 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
FAM228BP0C875 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM228BP0C875 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
FAM228BP0C875 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FAM228BP0C875 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM228BP0C875 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM228BP0C875 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FAM228BP0C875 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.27■□□□□ 0.03
FAM228BP0C875 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM228BP0C875 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.27■□□□□ 0.03
FAM228BP0C875 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FAM228BP0C875 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM228BP0C875 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM228BP0C875 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM228BP0C875 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
FAM228BP0C875 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
FAM228BP0C875 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.27■□□□□ 0.03
FAM228BP0C875 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM228BP0C875 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
FAM228BP0C875 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
FAM228BP0C875 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM228BP0C875 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 AC144522.1-201ENST00000625111 1658 ntBASIC15.26■□□□□ 0.03
FAM228BP0C875 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FAM228BP0C875 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.26■□□□□ 0.03
FAM228BP0C875 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM228BP0C875 NME2P1-201ENST00000426182 414 ntBASIC15.26■□□□□ 0.03
FAM228BP0C875 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM228BP0C875 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.26■□□□□ 0.03
FAM228BP0C875 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM228BP0C875 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.26■□□□□ 0.03
FAM228BP0C875 AC005962.1-201ENST00000584100 773 ntBASIC15.26■□□□□ 0.03
FAM228BP0C875 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.26■□□□□ 0.03
FAM228BP0C875 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
FAM228BP0C875 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM228BP0C875 AL358472.5-202ENST00000641448 1267 ntBASIC15.26■□□□□ 0.03
FAM228BP0C875 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.26■□□□□ 0.03
FAM228BP0C875 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM228BP0C875 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.26■□□□□ 0.03
FAM228BP0C875 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms