Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.98□□□□□ -0.01
RB1P06400 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.98□□□□□ -0.01
RB1P06400 AC005274.1-201ENST00000623460 802 ntBASIC14.98□□□□□ -0.01
RB1P06400 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.98□□□□□ -0.01
RB1P06400 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
RB1P06400 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.98□□□□□ -0.01
RB1P06400 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.98□□□□□ -0.01
RB1P06400 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.98□□□□□ -0.01
RB1P06400 AC117503.4-201ENST00000623229 1418 ntBASIC14.98□□□□□ -0.01
RB1P06400 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 AL354702.1-201ENST00000442006 1960 ntBASIC14.98□□□□□ -0.01
RB1P06400 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.97□□□□□ -0.01
RB1P06400 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RB1P06400 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.97□□□□□ -0.01
RB1P06400 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RB1P06400 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.97□□□□□ -0.01
RB1P06400 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.97□□□□□ -0.01
RB1P06400 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RB1P06400 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.97□□□□□ -0.01
RB1P06400 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RB1P06400 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.97□□□□□ -0.01
RB1P06400 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.97□□□□□ -0.01
RB1P06400 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.97□□□□□ -0.01
RB1P06400 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.97□□□□□ -0.01
RB1P06400 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.97□□□□□ -0.01
RB1P06400 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.97□□□□□ -0.01
RB1P06400 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.97□□□□□ -0.01
RB1P06400 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.97□□□□□ -0.01
RB1P06400 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.97□□□□□ -0.01
RB1P06400 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RB1P06400 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.97□□□□□ -0.01
RB1P06400 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.97□□□□□ -0.01
RB1P06400 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RB1P06400 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RB1P06400 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.96□□□□□ -0.01
RB1P06400 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.96□□□□□ -0.01
RB1P06400 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RB1P06400 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
RB1P06400 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RB1P06400 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RB1P06400 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 RPL3P2-204ENST00000413027 1203 ntBASIC14.96□□□□□ -0.01
RB1P06400 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.96□□□□□ -0.01
RB1P06400 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.96□□□□□ -0.01
RB1P06400 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.96□□□□□ -0.01
RB1P06400 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RB1P06400 AC092903.1-201ENST00000466506 262 ntBASIC14.96□□□□□ -0.01
RB1P06400 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.96□□□□□ -0.01
RB1P06400 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms