Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LTAP01374 AC022144.1-201ENST00000602255 1580 ntBASIC10.82□□□□□ -0.68
LTAP01374 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LTAP01374 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LTAP01374 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LTAP01374 PCDHB19P-202ENST00000625133 2914 ntBASIC10.81□□□□□ -0.68
LTAP01374 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 AC107375.1-201ENST00000564464 2231 ntBASIC10.81□□□□□ -0.68
LTAP01374 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.81□□□□□ -0.68
LTAP01374 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC10.81□□□□□ -0.68
LTAP01374 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
LTAP01374 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 IGHV3-42-201ENST00000520410 361 ntBASIC10.81□□□□□ -0.68
LTAP01374 DHDH-204ENST00000523250 634 ntTSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC10.81□□□□□ -0.68
LTAP01374 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC10.81□□□□□ -0.68
LTAP01374 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC10.81□□□□□ -0.68
LTAP01374 AL671883.3-201ENST00000603274 991 ntBASIC10.81□□□□□ -0.68
LTAP01374 METTL26-214ENST00000614890 801 ntTSL 3 BASIC10.81□□□□□ -0.68
LTAP01374 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 SALL4P6-201ENST00000429385 1691 ntBASIC10.81□□□□□ -0.68
LTAP01374 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 PI4KAP2-201ENST00000360806 2080 ntBASIC10.81□□□□□ -0.68
LTAP01374 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 AC002350.2-201ENST00000623894 1828 ntBASIC10.81□□□□□ -0.68
LTAP01374 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LTAP01374 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LTAP01374 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC10.8□□□□□ -0.68
LTAP01374 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LTAP01374 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 AC009093.2-202ENST00000620513 2079 ntBASIC10.8□□□□□ -0.68
LTAP01374 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC10.8□□□□□ -0.68
LTAP01374 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC10.8□□□□□ -0.68
LTAP01374 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC10.8□□□□□ -0.68
LTAP01374 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.8□□□□□ -0.68
LTAP01374 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC10.8□□□□□ -0.68
LTAP01374 BX842568.4-201ENST00000421222 227 ntBASIC10.8□□□□□ -0.68
LTAP01374 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LTAP01374 AL035414.1-201ENST00000451327 857 ntBASIC10.8□□□□□ -0.68
LTAP01374 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC10.8□□□□□ -0.68
LTAP01374 AL391280.1-201ENST00000506969 1062 ntBASIC10.8□□□□□ -0.68
LTAP01374 FADS2-205ENST00000517839 469 ntTSL 3 BASIC10.8□□□□□ -0.68
LTAP01374 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC10.8□□□□□ -0.68
LTAP01374 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC10.8□□□□□ -0.68
LTAP01374 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.8□□□□□ -0.68
LTAP01374 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC10.8□□□□□ -0.68
LTAP01374 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LTAP01374 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC10.8□□□□□ -0.68
LTAP01374 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC10.8□□□□□ -0.68
LTAP01374 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.8□□□□□ -0.68
LTAP01374 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC10.8□□□□□ -0.68
LTAP01374 RNA5-8SN1-201ENST00000610460 153 ntBASIC10.8□□□□□ -0.68
LTAP01374 RNA5-8SN5-202ENST00000612463 153 ntBASIC10.8□□□□□ -0.68
LTAP01374 RNA5-8SN4-201ENST00000613359 153 ntBASIC10.8□□□□□ -0.68
LTAP01374 RNA5-8SN5-201ENST00000619471 153 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms