Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RN7SL530P-201ENST00000485097 298 ntBASIC13.18□□□□□ -0.3
NKX2-2O95096 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX2-2O95096 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.18□□□□□ -0.3
NKX2-2O95096 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-2O95096 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-2O95096 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-2O95096 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-2O95096 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-2O95096 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.18□□□□□ -0.3
NKX2-2O95096 AL645939.5-201ENST00000606834 243 ntBASIC13.18□□□□□ -0.3
NKX2-2O95096 AC026740.1-201ENST00000607068 791 ntBASIC13.18□□□□□ -0.3
NKX2-2O95096 AC138649.2-201ENST00000615886 705 ntBASIC13.18□□□□□ -0.3
NKX2-2O95096 CR392039.2-201ENST00000623182 509 ntBASIC13.18□□□□□ -0.3
NKX2-2O95096 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.18□□□□□ -0.3
NKX2-2O95096 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NKX2-2O95096 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-2O95096 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NKX2-2O95096 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-2O95096 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 ST20-AS1-201ENST00000560255 4223 ntBASIC13.18□□□□□ -0.3
NKX2-2O95096 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-2O95096 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-2O95096 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-2O95096 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-2O95096 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-2O95096 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 LINC01165-201ENST00000445190 1623 ntBASIC13.17□□□□□ -0.3
NKX2-2O95096 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.17□□□□□ -0.3
NKX2-2O95096 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-2O95096 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.17□□□□□ -0.3
NKX2-2O95096 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-2O95096 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX2-2O95096 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NKX2-2O95096 FAM86MP-201ENST00000340703 885 ntBASIC13.17□□□□□ -0.3
NKX2-2O95096 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.17□□□□□ -0.3
NKX2-2O95096 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX2-2O95096 AC016700.1-201ENST00000429424 312 ntBASIC13.17□□□□□ -0.3
NKX2-2O95096 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-2O95096 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 AP001258.2-201ENST00000529891 490 ntBASIC13.17□□□□□ -0.3
NKX2-2O95096 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.17□□□□□ -0.3
NKX2-2O95096 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX2-2O95096 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX2-2O95096 MIR6869-201ENST00000619434 62 ntBASIC13.17□□□□□ -0.3
NKX2-2O95096 AL805961.1-203ENST00000641078 1258 ntBASIC13.17□□□□□ -0.3
NKX2-2O95096 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.17□□□□□ -0.3
NKX2-2O95096 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NKX2-2O95096 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-2O95096 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-2O95096 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-2O95096 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-2O95096 AC015909.5-201ENST00000624336 2266 ntBASIC13.16□□□□□ -0.3
NKX2-2O95096 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-2O95096 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NKX2-2O95096 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX2-2O95096 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NKX2-2O95096 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-2O95096 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-2O95096 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX2-2O95096 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX2-2O95096 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms