Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.07■□□□□ 0
OPHN1O60890 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.07■□□□□ 0
OPHN1O60890 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
OPHN1O60890 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
OPHN1O60890 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
OPHN1O60890 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.06■□□□□ 0
OPHN1O60890 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.06■□□□□ 0
OPHN1O60890 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.06■□□□□ 0
OPHN1O60890 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.06■□□□□ 0
OPHN1O60890 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
OPHN1O60890 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.06■□□□□ 0
OPHN1O60890 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.06■□□□□ 0
OPHN1O60890 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.06■□□□□ 0
OPHN1O60890 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.06■□□□□ 0
OPHN1O60890 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.06■□□□□ 0
OPHN1O60890 SORD2P-201ENST00000558556 1069 ntBASIC15.06■□□□□ 0
OPHN1O60890 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.06■□□□□ 0
OPHN1O60890 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.06■□□□□ 0
OPHN1O60890 SPCS2P2-201ENST00000603270 608 ntBASIC15.06■□□□□ 0
OPHN1O60890 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 AC091544.8-201ENST00000619490 361 ntBASIC15.06■□□□□ 0
OPHN1O60890 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.06■□□□□ 0
OPHN1O60890 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.06■□□□□ 0
OPHN1O60890 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
OPHN1O60890 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
OPHN1O60890 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
OPHN1O60890 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
OPHN1O60890 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
OPHN1O60890 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.06■□□□□ 0
OPHN1O60890 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
OPHN1O60890 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
OPHN1O60890 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
OPHN1O60890 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
OPHN1O60890 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.05■□□□□ 0
OPHN1O60890 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
OPHN1O60890 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.05■□□□□ 0
OPHN1O60890 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
OPHN1O60890 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
OPHN1O60890 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
OPHN1O60890 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
OPHN1O60890 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
OPHN1O60890 AC005562.1-201ENST00000583030 3219 ntBASIC15.05■□□□□ -0
OPHN1O60890 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
OPHN1O60890 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
OPHN1O60890 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
OPHN1O60890 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
OPHN1O60890 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
OPHN1O60890 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.05■□□□□ -0
OPHN1O60890 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.05■□□□□ -0
OPHN1O60890 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
OPHN1O60890 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.05■□□□□ -0
OPHN1O60890 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.05■□□□□ -0
OPHN1O60890 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms