Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.29■□□□□ 0.04
O00370 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.29■□□□□ 0.04
O00370 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.29■□□□□ 0.04
O00370 AL591471.1-201ENST00000621855 229 ntBASIC15.29■□□□□ 0.04
O00370 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 AGAP10P-201ENST00000454844 2418 ntBASIC15.29■□□□□ 0.04
O00370 AC105206.1-202ENST00000314927 2368 ntBASIC15.29■□□□□ 0.04
O00370 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
O00370 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.29■□□□□ 0.04
O00370 AC090643.2-201ENST00000623442 2029 ntBASIC15.29■□□□□ 0.04
O00370 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
O00370 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
O00370 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.29■□□□□ 0.04
O00370 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
O00370 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
O00370 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
O00370 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.28■□□□□ 0.04
O00370 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 AC111170.3-201ENST00000624282 2464 ntBASIC15.28■□□□□ 0.04
O00370 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.28■□□□□ 0.04
O00370 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 AP002353.1-201ENST00000528257 1599 ntBASIC15.28■□□□□ 0.04
O00370 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.28■□□□□ 0.04
O00370 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
O00370 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.28■□□□□ 0.04
O00370 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.28■□□□□ 0.04
O00370 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 GPAA1P2-201ENST00000417923 928 ntBASIC15.28■□□□□ 0.04
O00370 AC092580.1-201ENST00000433998 658 ntBASIC15.28■□□□□ 0.04
O00370 AC125604.1-201ENST00000496255 707 ntBASIC15.28■□□□□ 0.04
O00370 RCC2P8-201ENST00000502779 1035 ntBASIC15.28■□□□□ 0.04
O00370 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.28■□□□□ 0.04
O00370 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.28■□□□□ 0.04
O00370 AL645939.5-201ENST00000606834 243 ntBASIC15.28■□□□□ 0.04
O00370 AC138649.2-201ENST00000615886 705 ntBASIC15.28■□□□□ 0.04
O00370 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.28■□□□□ 0.04
O00370 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
O00370 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.28■□□□□ 0.04
O00370 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.28■□□□□ 0.04
O00370 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
O00370 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.28■□□□□ 0.04
O00370 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
O00370 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
O00370 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.27■□□□□ 0.04
O00370 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
O00370 LINC02486-201ENST00000604157 3000 ntBASIC15.27■□□□□ 0.04
O00370 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
O00370 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.27■□□□□ 0.04
O00370 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
O00370 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.27■□□□□ 0.04
O00370 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.27■□□□□ 0.04
O00370 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
O00370 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 PTENP1-202ENST00000532280 3996 ntBASIC15.27■□□□□ 0.04
O00370 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
O00370 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
O00370 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
O00370 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
O00370 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.27■□□□□ 0.04
O00370 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.27■□□□□ 0.04
O00370 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.27■□□□□ 0.04
O00370 KRT8P13-201ENST00000463294 1010 ntBASIC15.27■□□□□ 0.04
O00370 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.27■□□□□ 0.04
O00370 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms