Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 AC015909.3-201ENST00000572855 1794 ntBASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 FXNP2-201ENST00000411625 547 ntBASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 XBP1P1-201ENST00000436573 652 ntBASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 AL109837.1-201ENST00000603272 613 ntBASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 AC007718.1-201ENST00000621078 280 ntBASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 AC006480.2-201ENST00000609770 1337 ntBASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 MIR33B-201ENST00000385104 96 ntBASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AC026320.2-201ENST00000434379 478 ntBASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 RPS2P36-201ENST00000456516 831 ntBASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AHCYP4-201ENST00000419201 1315 ntBASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 AC215219.1-201ENST00000400706 1817 ntBASIC13.09□□□□□ -0.31
NPIPA2E9PIF3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms