Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COMMD3-BMI1R4GMX3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.12■□□□□ 0.97
COMMD3-BMI1R4GMX3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COMMD3-BMI1R4GMX3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COMMD3-BMI1R4GMX3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.12■□□□□ 0.97
COMMD3-BMI1R4GMX3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.12■□□□□ 0.97
COMMD3-BMI1R4GMX3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COMMD3-BMI1R4GMX3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COMMD3-BMI1R4GMX3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD3-BMI1R4GMX3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD3-BMI1R4GMX3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD3-BMI1R4GMX3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COMMD3-BMI1R4GMX3 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.09■□□□□ 0.97
COMMD3-BMI1R4GMX3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD3-BMI1R4GMX3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD3-BMI1R4GMX3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD3-BMI1R4GMX3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD3-BMI1R4GMX3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COMMD3-BMI1R4GMX3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 ECEL1P2-201ENST00000461596 1295 ntBASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD3-BMI1R4GMX3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
COMMD3-BMI1R4GMX3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.08■□□□□ 0.96
COMMD3-BMI1R4GMX3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COMMD3-BMI1R4GMX3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COMMD3-BMI1R4GMX3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.07■□□□□ 0.96
COMMD3-BMI1R4GMX3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD3-BMI1R4GMX3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.06■□□□□ 0.96
COMMD3-BMI1R4GMX3 AC022413.1-201ENST00000624602 984 ntBASIC21.06■□□□□ 0.96
COMMD3-BMI1R4GMX3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COMMD3-BMI1R4GMX3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.06■□□□□ 0.96
COMMD3-BMI1R4GMX3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COMMD3-BMI1R4GMX3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COMMD3-BMI1R4GMX3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms