Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 RARRES2P6-201ENST00000567333 442 ntBASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 AC233992.3-201ENST00000607491 485 ntBASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 pRNA.6-201ENST00000610482 90 ntBASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 pRNA.5-201ENST00000612139 90 ntBASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 pRNA.11-201ENST00000618423 90 ntBASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 pRNA.13-201ENST00000619112 90 ntBASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 BX842568.3-201ENST00000418104 571 ntBASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HS3ST3A1Q9Y663 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
HS3ST3A1Q9Y663 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HS3ST3A1Q9Y663 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HS3ST3A1Q9Y663 AC099791.1-201ENST00000416440 715 ntBASIC22.3■■□□□ 1.16
HS3ST3A1Q9Y663 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.3■■□□□ 1.16
HS3ST3A1Q9Y663 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.3■■□□□ 1.16
HS3ST3A1Q9Y663 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.3■■□□□ 1.16
HS3ST3A1Q9Y663 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
HS3ST3A1Q9Y663 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HS3ST3A1Q9Y663 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
HS3ST3A1Q9Y663 AC026271.2-201ENST00000428091 497 ntBASIC22.29■■□□□ 1.16
HS3ST3A1Q9Y663 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HS3ST3A1Q9Y663 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
HS3ST3A1Q9Y663 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HS3ST3A1Q9Y663 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
HS3ST3A1Q9Y663 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HS3ST3A1Q9Y663 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HS3ST3A1Q9Y663 FP325331.1-202ENST00000623531 1380 ntBASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
HS3ST3A1Q9Y663 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
HS3ST3A1Q9Y663 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HS3ST3A1Q9Y663 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HS3ST3A1Q9Y663 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
HS3ST3A1Q9Y663 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
HS3ST3A1Q9Y663 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.26■■□□□ 1.15
HS3ST3A1Q9Y663 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
HS3ST3A1Q9Y663 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HS3ST3A1Q9Y663 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HS3ST3A1Q9Y663 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 IRS3P-201ENST00000223076 1006 ntBASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HS3ST3A1Q9Y663 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HS3ST3A1Q9Y663 AC020928.2-201ENST00000588717 2197 ntBASIC22.24■■□□□ 1.15
HS3ST3A1Q9Y663 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.24■■□□□ 1.15
HS3ST3A1Q9Y663 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.24■■□□□ 1.15
HS3ST3A1Q9Y663 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.24■■□□□ 1.15
HS3ST3A1Q9Y663 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HS3ST3A1Q9Y663 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HS3ST3A1Q9Y663 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HS3ST3A1Q9Y663 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HS3ST3A1Q9Y663 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HS3ST3A1Q9Y663 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HS3ST3A1Q9Y663 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms