Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC34.73■■■■□ 3.15
CDC42BPBQ9Y5S2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
CDC42BPBQ9Y5S2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CDC42BPBQ9Y5S2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC34.73■■■■□ 3.15
CDC42BPBQ9Y5S2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC34.73■■■■□ 3.15
CDC42BPBQ9Y5S2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
CDC42BPBQ9Y5S2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC34.72■■■■□ 3.15
CDC42BPBQ9Y5S2 MIR572-201ENST00000384983 95 ntBASIC34.72■■■■□ 3.15
CDC42BPBQ9Y5S2 AC123595.1-201ENST00000440769 1046 ntBASIC34.72■■■■□ 3.15
CDC42BPBQ9Y5S2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPBQ9Y5S2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPBQ9Y5S2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC34.72■■■■□ 3.15
CDC42BPBQ9Y5S2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPBQ9Y5S2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CDC42BPBQ9Y5S2 AL358852.1-201ENST00000623174 1268 ntBASIC34.72■■■■□ 3.15
CDC42BPBQ9Y5S2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CDC42BPBQ9Y5S2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC34.71■■■■□ 3.15
CDC42BPBQ9Y5S2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC34.71■■■■□ 3.15
CDC42BPBQ9Y5S2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC34.71■■■■□ 3.15
CDC42BPBQ9Y5S2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC34.71■■■■□ 3.15
CDC42BPBQ9Y5S2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CDC42BPBQ9Y5S2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CDC42BPBQ9Y5S2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CDC42BPBQ9Y5S2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC34.7■■■■□ 3.15
CDC42BPBQ9Y5S2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
CDC42BPBQ9Y5S2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
CDC42BPBQ9Y5S2 MIR6084-201ENST00000622012 110 ntBASIC34.69■■■■□ 3.14
CDC42BPBQ9Y5S2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPBQ9Y5S2 AL161729.1-201ENST00000604104 1402 ntBASIC34.69■■■■□ 3.14
CDC42BPBQ9Y5S2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPBQ9Y5S2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPBQ9Y5S2 CCDC92B-201ENST00000575506 885 ntBASIC34.69■■■■□ 3.14
CDC42BPBQ9Y5S2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC34.69■■■■□ 3.14
CDC42BPBQ9Y5S2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CDC42BPBQ9Y5S2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CDC42BPBQ9Y5S2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC34.68■■■■□ 3.14
CDC42BPBQ9Y5S2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC34.68■■■■□ 3.14
CDC42BPBQ9Y5S2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC34.68■■■■□ 3.14
CDC42BPBQ9Y5S2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC34.68■■■■□ 3.14
CDC42BPBQ9Y5S2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC34.68■■■■□ 3.14
CDC42BPBQ9Y5S2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
CDC42BPBQ9Y5S2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
CDC42BPBQ9Y5S2 AC010525.1-201ENST00000585559 441 ntBASIC34.67■■■■□ 3.14
CDC42BPBQ9Y5S2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC34.67■■■■□ 3.14
CDC42BPBQ9Y5S2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
CDC42BPBQ9Y5S2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
CDC42BPBQ9Y5S2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CDC42BPBQ9Y5S2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
CDC42BPBQ9Y5S2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC34.66■■■■□ 3.14
CDC42BPBQ9Y5S2 KRT18P14-201ENST00000534205 1250 ntBASIC34.66■■■■□ 3.14
CDC42BPBQ9Y5S2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CDC42BPBQ9Y5S2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CDC42BPBQ9Y5S2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC34.64■■■■□ 3.14
CDC42BPBQ9Y5S2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC34.64■■■■□ 3.14
CDC42BPBQ9Y5S2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CDC42BPBQ9Y5S2 HLA-L-211ENST00000482052 1765 ntBASIC34.64■■■■□ 3.14
CDC42BPBQ9Y5S2 ALDH1A3-203ENST00000557963 1670 ntBASIC34.64■■■■□ 3.14
CDC42BPBQ9Y5S2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC34.64■■■■□ 3.14
CDC42BPBQ9Y5S2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CDC42BPBQ9Y5S2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 TERF1P2-201ENST00000583350 1212 ntBASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 AL354811.1-201ENST00000610286 706 ntBASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 AC141586.4-201ENST00000624558 1573 ntBASIC34.63■■■■□ 3.13
CDC42BPBQ9Y5S2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC34.62■■■■□ 3.13
CDC42BPBQ9Y5S2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
CDC42BPBQ9Y5S2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC34.62■■■■□ 3.13
CDC42BPBQ9Y5S2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC34.62■■■■□ 3.13
CDC42BPBQ9Y5S2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
CDC42BPBQ9Y5S2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC34.62■■■■□ 3.13
CDC42BPBQ9Y5S2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC34.62■■■■□ 3.13
CDC42BPBQ9Y5S2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 NME4-202ENST00000382940 766 ntTSL 3 BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC34.61■■■■□ 3.13
CDC42BPBQ9Y5S2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC34.6■■■■□ 3.13
CDC42BPBQ9Y5S2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
CDC42BPBQ9Y5S2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC34.6■■■■□ 3.13
CDC42BPBQ9Y5S2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC34.6■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms