Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.14■■■□□ 2.58
NINLQ9Y2I6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
NINLQ9Y2I6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
NINLQ9Y2I6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
NINLQ9Y2I6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.14■■■□□ 2.58
NINLQ9Y2I6 AL136967.2-201ENST00000623968 743 ntBASIC31.14■■■□□ 2.58
NINLQ9Y2I6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NINLQ9Y2I6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
NINLQ9Y2I6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NINLQ9Y2I6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NINLQ9Y2I6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NINLQ9Y2I6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
NINLQ9Y2I6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NINLQ9Y2I6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.13■■■□□ 2.57
NINLQ9Y2I6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.13■■■□□ 2.57
NINLQ9Y2I6 AC027682.1-201ENST00000562846 899 ntBASIC31.13■■■□□ 2.57
NINLQ9Y2I6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
NINLQ9Y2I6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.12■■■□□ 2.57
NINLQ9Y2I6 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.12■■■□□ 2.57
NINLQ9Y2I6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.12■■■□□ 2.57
NINLQ9Y2I6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
NINLQ9Y2I6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
NINLQ9Y2I6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
NINLQ9Y2I6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NINLQ9Y2I6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
NINLQ9Y2I6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.1■■■□□ 2.57
NINLQ9Y2I6 MIR3181-201ENST00000578512 73 ntBASIC31.1■■■□□ 2.57
NINLQ9Y2I6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NINLQ9Y2I6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.1■■■□□ 2.57
NINLQ9Y2I6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NINLQ9Y2I6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NINLQ9Y2I6 LINC00543-201ENST00000567234 1845 ntBASIC31.09■■■□□ 2.57
NINLQ9Y2I6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.09■■■□□ 2.57
NINLQ9Y2I6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NINLQ9Y2I6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NINLQ9Y2I6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.08■■■□□ 2.57
NINLQ9Y2I6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.08■■■□□ 2.57
NINLQ9Y2I6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NINLQ9Y2I6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NINLQ9Y2I6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
NINLQ9Y2I6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.08■■■□□ 2.57
NINLQ9Y2I6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
NINLQ9Y2I6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NINLQ9Y2I6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.06■■■□□ 2.56
NINLQ9Y2I6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NINLQ9Y2I6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
NINLQ9Y2I6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NINLQ9Y2I6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NINLQ9Y2I6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NINLQ9Y2I6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
NINLQ9Y2I6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 RASA4CP-201ENST00000424092 1398 ntBASIC31.05■■■□□ 2.56
NINLQ9Y2I6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.05■■■□□ 2.56
NINLQ9Y2I6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NINLQ9Y2I6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.04■■■□□ 2.56
NINLQ9Y2I6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NINLQ9Y2I6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.04■■■□□ 2.56
NINLQ9Y2I6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
NINLQ9Y2I6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NINLQ9Y2I6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
NINLQ9Y2I6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC31.03■■■□□ 2.56
NINLQ9Y2I6 AC105265.2-201ENST00000467189 838 ntBASIC31.03■■■□□ 2.56
NINLQ9Y2I6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.03■■■□□ 2.56
NINLQ9Y2I6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
NINLQ9Y2I6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
NINLQ9Y2I6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
NINLQ9Y2I6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
NINLQ9Y2I6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
NINLQ9Y2I6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
NINLQ9Y2I6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
NINLQ9Y2I6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.02■■■□□ 2.56
NINLQ9Y2I6 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.02■■■□□ 2.56
NINLQ9Y2I6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms