Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 AL136162.1-201ENST00000607711 1078 ntBASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
UBQLN1Q9UMX0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 PBX2P1-201ENST00000493219 1291 ntBASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 AC106739.1-201ENST00000617035 715 ntBASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UBQLN1Q9UMX0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBQLN1Q9UMX0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
UBQLN1Q9UMX0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.32■■□□□ 1.48
UBQLN1Q9UMX0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
UBQLN1Q9UMX0 AC133561.4-201ENST00000566112 224 ntBASIC24.32■■□□□ 1.48
UBQLN1Q9UMX0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
UBQLN1Q9UMX0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.32■■□□□ 1.48
UBQLN1Q9UMX0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBQLN1Q9UMX0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
UBQLN1Q9UMX0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 AC019069.1-201ENST00000610008 1333 ntBASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 AC135279.3-201ENST00000610945 1311 ntBASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
UBQLN1Q9UMX0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBQLN1Q9UMX0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBQLN1Q9UMX0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBQLN1Q9UMX0 AC024257.2-201ENST00000549699 147 ntBASIC24.3■■□□□ 1.48
UBQLN1Q9UMX0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBQLN1Q9UMX0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBQLN1Q9UMX0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBQLN1Q9UMX0 SERBP1P1-201ENST00000396021 1160 ntBASIC24.29■■□□□ 1.48
UBQLN1Q9UMX0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.29■■□□□ 1.48
UBQLN1Q9UMX0 AC009086.3-201ENST00000623486 1008 ntBASIC24.29■■□□□ 1.48
UBQLN1Q9UMX0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
UBQLN1Q9UMX0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
UBQLN1Q9UMX0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UBQLN1Q9UMX0 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.28■■□□□ 1.48
UBQLN1Q9UMX0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.28■■□□□ 1.48
UBQLN1Q9UMX0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.28■■□□□ 1.48
UBQLN1Q9UMX0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UBQLN1Q9UMX0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 AC006455.2-201ENST00000429931 906 ntBASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 AL138724.1-201ENST00000606771 1088 ntBASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UBQLN1Q9UMX0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 AC005837.3-201ENST00000612163 286 ntBASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
UBQLN1Q9UMX0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
UBQLN1Q9UMX0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
UBQLN1Q9UMX0 ABCB10P4-201ENST00000566803 2184 ntBASIC24.25■■□□□ 1.47
UBQLN1Q9UMX0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.25■■□□□ 1.47
UBQLN1Q9UMX0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBQLN1Q9UMX0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.25■■□□□ 1.47
UBQLN1Q9UMX0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBQLN1Q9UMX0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
UBQLN1Q9UMX0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.24■■□□□ 1.47
UBQLN1Q9UMX0 AC011298.3-201ENST00000615796 283 ntBASIC24.24■■□□□ 1.47
UBQLN1Q9UMX0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.24■■□□□ 1.47
UBQLN1Q9UMX0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBQLN1Q9UMX0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.23■■□□□ 1.47
UBQLN1Q9UMX0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.23■■□□□ 1.47
UBQLN1Q9UMX0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
UBQLN1Q9UMX0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
UBQLN1Q9UMX0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms