Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.68■■■□□ 2.5
NPC1L1Q9UHC9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NPC1L1Q9UHC9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NPC1L1Q9UHC9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NPC1L1Q9UHC9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC30.67■■■□□ 2.5
NPC1L1Q9UHC9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
NPC1L1Q9UHC9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NPC1L1Q9UHC9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
NPC1L1Q9UHC9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 H19-210ENST00000439725 1929 ntTSL 2 BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.66■■■□□ 2.5
NPC1L1Q9UHC9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NPC1L1Q9UHC9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
NPC1L1Q9UHC9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC30.65■■■□□ 2.5
NPC1L1Q9UHC9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
NPC1L1Q9UHC9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC30.65■■■□□ 2.5
NPC1L1Q9UHC9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC30.65■■■□□ 2.5
NPC1L1Q9UHC9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
NPC1L1Q9UHC9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
NPC1L1Q9UHC9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
NPC1L1Q9UHC9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.64■■■□□ 2.5
NPC1L1Q9UHC9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
NPC1L1Q9UHC9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
NPC1L1Q9UHC9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
NPC1L1Q9UHC9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
NPC1L1Q9UHC9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.63■■■□□ 2.49
NPC1L1Q9UHC9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NPC1L1Q9UHC9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NPC1L1Q9UHC9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 AC092068.2-201ENST00000590491 1708 ntBASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 AL136116.3-201ENST00000402907 1138 ntBASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 AC144652.1-201ENST00000609974 1624 ntBASIC30.62■■■□□ 2.49
NPC1L1Q9UHC9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 SRD5A1P1-201ENST00000442297 786 ntBASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NPC1L1Q9UHC9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
NPC1L1Q9UHC9 FP325331.1-202ENST00000623531 1380 ntBASIC30.6■■■□□ 2.49
NPC1L1Q9UHC9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NPC1L1Q9UHC9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 AC241377.3-202ENST00000626088 1088 ntBASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 AC241585.3-202ENST00000628937 1088 ntBASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 AC245100.8-202ENST00000629247 1058 ntBASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 AC079630.1-202ENST00000618127 1840 ntBASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC30.59■■■□□ 2.49
NPC1L1Q9UHC9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NPC1L1Q9UHC9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NPC1L1Q9UHC9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.58■■■□□ 2.49
NPC1L1Q9UHC9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.58■■■□□ 2.49
NPC1L1Q9UHC9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 AC008406.3-201ENST00000620001 1374 ntBASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC30.57■■■□□ 2.48
NPC1L1Q9UHC9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
NPC1L1Q9UHC9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.56■■■□□ 2.48
NPC1L1Q9UHC9 DUX4L4-201ENST00000566884 1269 ntBASIC30.56■■■□□ 2.48
NPC1L1Q9UHC9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.56■■■□□ 2.48
NPC1L1Q9UHC9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NPC1L1Q9UHC9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.55■■■□□ 2.48
NPC1L1Q9UHC9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NPC1L1Q9UHC9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
NPC1L1Q9UHC9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
NPC1L1Q9UHC9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC30.55■■■□□ 2.48
NPC1L1Q9UHC9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
NPC1L1Q9UHC9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms