Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CDC42SE1Q9NRR8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 AP003733.4-201ENST00000623785 1697 ntBASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 AP004609.3-201ENST00000610705 1884 ntBASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CDC42SE1Q9NRR8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC11.73□□□□□ -0.53
CDC42SE1Q9NRR8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE1Q9NRR8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 AP004833.2-201ENST00000532228 1454 ntBASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
CDC42SE1Q9NRR8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE1Q9NRR8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CDC42SE1Q9NRR8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE1Q9NRR8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 BID-212ENST00000614949 1988 ntTSL 5 BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 LINC01521-201ENST00000504184 1943 ntBASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
CDC42SE1Q9NRR8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms