Protein–RNA interactions for Protein: Q9NRJ4

TULP4, Tubby-related protein 4, humanhuman

Predictions only

Length 1,543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4Q9NRJ4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 MIR3181-201ENST00000578512 73 ntBASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC31.59■■■□□ 2.65
TULP4Q9NRJ4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
TULP4Q9NRJ4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
TULP4Q9NRJ4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC31.58■■■□□ 2.65
TULP4Q9NRJ4 AC233992.3-201ENST00000607491 485 ntBASIC31.58■■■□□ 2.65
TULP4Q9NRJ4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
TULP4Q9NRJ4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
TULP4Q9NRJ4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.57■■■□□ 2.64
TULP4Q9NRJ4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.57■■■□□ 2.64
TULP4Q9NRJ4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.57■■■□□ 2.64
TULP4Q9NRJ4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TULP4Q9NRJ4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
TULP4Q9NRJ4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TULP4Q9NRJ4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TULP4Q9NRJ4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TULP4Q9NRJ4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
TULP4Q9NRJ4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.56■■■□□ 2.64
TULP4Q9NRJ4 AC142381.3-201ENST00000568208 1670 ntBASIC31.56■■■□□ 2.64
TULP4Q9NRJ4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
TULP4Q9NRJ4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TULP4Q9NRJ4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
TULP4Q9NRJ4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
TULP4Q9NRJ4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TULP4Q9NRJ4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TULP4Q9NRJ4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.54■■■□□ 2.64
TULP4Q9NRJ4 AC135731.1-201ENST00000569415 2548 ntBASIC31.54■■■□□ 2.64
TULP4Q9NRJ4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC31.54■■■□□ 2.64
TULP4Q9NRJ4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TULP4Q9NRJ4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TULP4Q9NRJ4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC31.54■■■□□ 2.64
TULP4Q9NRJ4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC31.54■■■□□ 2.64
TULP4Q9NRJ4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TULP4Q9NRJ4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TULP4Q9NRJ4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
TULP4Q9NRJ4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.52■■■□□ 2.64
TULP4Q9NRJ4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
TULP4Q9NRJ4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TULP4Q9NRJ4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.52■■■□□ 2.64
TULP4Q9NRJ4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TULP4Q9NRJ4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC31.51■■■□□ 2.63
TULP4Q9NRJ4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
TULP4Q9NRJ4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.51■■■□□ 2.63
TULP4Q9NRJ4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.51■■■□□ 2.63
TULP4Q9NRJ4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
TULP4Q9NRJ4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TULP4Q9NRJ4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC31.5■■■□□ 2.63
TULP4Q9NRJ4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
TULP4Q9NRJ4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.5■■■□□ 2.63
TULP4Q9NRJ4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC31.5■■■□□ 2.63
TULP4Q9NRJ4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
TULP4Q9NRJ4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TULP4Q9NRJ4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 SLC47A1P1-202ENST00000449666 945 ntBASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 AL031602.1-201ENST00000633169 911 ntBASIC31.49■■■□□ 2.63
TULP4Q9NRJ4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TULP4Q9NRJ4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.48■■■□□ 2.63
TULP4Q9NRJ4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TULP4Q9NRJ4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
TULP4Q9NRJ4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
TULP4Q9NRJ4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TULP4Q9NRJ4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
TULP4Q9NRJ4 GRAMD4P2-201ENST00000423297 1097 ntBASIC31.48■■■□□ 2.63
TULP4Q9NRJ4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TULP4Q9NRJ4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
TULP4Q9NRJ4 AC020928.2-201ENST00000588717 2197 ntBASIC31.47■■■□□ 2.63
TULP4Q9NRJ4 AK1-201ENST00000223836 736 ntTSL 3 BASIC31.47■■■□□ 2.63
TULP4Q9NRJ4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TULP4Q9NRJ4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.46■■■□□ 2.63
TULP4Q9NRJ4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.46■■■□□ 2.63
TULP4Q9NRJ4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
TULP4Q9NRJ4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms